| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4276 |
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| Symbol | |
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| ID | 4013039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4506790 |
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| End bp | 4509129 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637943928 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_551066 |
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| Protein GI | 91790114 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAGGA CAGGCAGCTG CTCGATAACT TTGTCAGGCA CCGCGCAGGG CATCATTGAC
CGCAAGCTCC CCGCCGAGGC CTTGTGCGCG GGCGGCATGG GTGACACACC ATTGCGCCTG
CTGGCAGACG CAATACCCCA GATCGTCTGG ATGATGCGGG CCGATGGCAG GTACACCTAC
TTCAATCGAC GGTGGTTTGA CTATTGCGGC TTGTCCCTGG AGGAGAGCCT GGACTGCGGC
TGGCCCGGCC TCGTTCATCC CGATGACGGC CCGCGAGTTG CGGAACTTTG GGCGCAGGCA
TTCAAGAGTG GCGAGACCTG TGAGGTCGAA TACCGTCTGC GCCGGGCCGA TGGCGTCTAT
CGCTGGATGC TGGGCCGGGC GGTTGTGCAA TATGATGCGG CGGGCCTGAC GGCCCACTGG
CTGGGTACCT TGACCGATAT TGACGACCTG AAGCAGGCCG CTGTTTCTCT GGAGAAAGAT
CTCTCCATGA ACCGCATCGC TGGCAGGGTT GCGCGCCTGG GGGGATGGAC GATTGAACTG
CCGGACCGCA CGCTGACCTG GTCGGATGAA AACTGCCTGA TTCACGACGT TGCGCCCGGC
TATCAACCGA CGCTGGAAGA GGGGATCAGC TACTTTCTCC CGGAGCATCG GCCGATAGTC
ATCCGTTATG TGCAGGACTG CGCGGAACAT GGCACGCCTT ACGAATTTGT GCTGCCCAAG
CTCACCGCCA AGGGCCGGCG CATCTGGGTG CGGTCCATTG GCGAGGCAGT GCGTGATGCC
ACCGGAAAGA TCATCCGCAT TCAGGGGGCC TTCCAGGATA TCTCGGAGCA GAAGGAGGCG
GAAGCGCGCA CGCTCGCGCT GGAGGCACAG CTCCTCACCA CGCTGGAGAG CATCACCGAC
GGGTTTTTCC TGATCGACAG GGAATGGAAG TTCACCTTCG TCAACGGTCA GGCAGAGCGA
ATGCTCAAGC GCCGCCGGGA AGACCTGATG GGCCATACGC TGTGGCAGGA ACTTCCCGAG
GCCGTGGGCG CGCGCATCGA ACGCGAATAC CGCCTGGCGG CTCAAGCGCA ACACACGACC
CGCTTTGAGG CTTTTCATCA GCCGCTGCAG ACCTGGTTTG CCTTCCACGT CTACCCCACC
GAGGCGGGGC TCGCGGTTTA CTTTCAGGAC ATCACCCAGC GGCGTGCAGA GCAGGCGCAG
CTGCGCCTGC TGGAAACGGC GGTTTCGCGC CTGAACGACA TGGTGGTCAT CACGGAGGCT
GAAGCCTTCA GCGATGCGGG TCCGCGGATT GTTTTTGTGA ACGATGCCTT TGAGCGGCAC
ACCGGCTACA GCCGGGAGGA GGCCGTTGGA CATACCTCGG CGCTTCTGTG GGGGCCCAAA
ACGCAGCAGG CCGAACTGGA CCGGATTCGC GCCGCGATGA AAAAGTGGCA AGCGGTACGC
GCGGAAATTG TCGTTTACAC CAAGGCCGGT CAGGAGCTCT GGCTGGAAAC AGAGGTCGCG
CCCATTGCCG ACGAGTCCGG CAGGTTTACC CACTGGGTGG CCGTCGAGCG CGACATTACC
GAGCGCCGGC AACAGCAGGA AGAAATTCTC AGTCTCAACG GCGAACTCGA GGAGCGGGTA
TTGCTGCGCA CAGCCCAGCT CGCAGCGGCG AACAAGGAAA TGGAGTCTTT CGCCTACTCC
GTGTCCCATG ACCTGCGCTC GCCCCTCAAT ACCATCCACG GATTCAGCCA GCTGCTCGCG
AAGGCCGAAG CAGAAAATAT CAGCGACAAG GGCAAGCACT ACCTGGACCG GATTGGTGTC
GGGGTCAAGG AGATGGGCGA GTTGATCGAG GGCCTGCTGA CCCTGGCCCA GCTGTCCCGC
GAGCAGATCA AGTCCGAGCA TGTCGATCTT TCGGCAGTCG CCCGGCGGAT CGAGCAGGAG
CACCGGGAGC GGGAGCCGCA GCGCCAGGCG CAGGTGCTCA TCCAGGAGGG CTTGTGCGTG
CAGGGCGACC CCCGCCTGCT GTCGGCCGTG TTGCAAAACC TGCTGGCCAA CGCGTGGAAG
TTCACTTCCA GGCAGTCGCT GACGCGGATT GAGGTGGGCT GCGAGCGGGG CTCCGATGGC
GACACCGTCT TTTTTGTCAA GGACAACGGT GTCGGATTTG ACATGGCCTT CTCGCACAAG
CTTTTTGGCA CCTTCGAGCG CCTTCATTCA CCGGGAGATT TCGCCGGGAC CGGCATCGGG
CTGGCCACCG TGAAGCGTGT CATCGACCGT CACGGCGGCC GTGTCTGGGC TGAAGGCAAA
TTGAACGAAG GCGCGATGTT CTGCTTTACC CTGGGTCAAC GCAGCGAATC GGCAACCTGA
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| Protein sequence | MNRTGSCSIT LSGTAQGIID RKLPAEALCA GGMGDTPLRL LADAIPQIVW MMRADGRYTY
FNRRWFDYCG LSLEESLDCG WPGLVHPDDG PRVAELWAQA FKSGETCEVE YRLRRADGVY
RWMLGRAVVQ YDAAGLTAHW LGTLTDIDDL KQAAVSLEKD LSMNRIAGRV ARLGGWTIEL
PDRTLTWSDE NCLIHDVAPG YQPTLEEGIS YFLPEHRPIV IRYVQDCAEH GTPYEFVLPK
LTAKGRRIWV RSIGEAVRDA TGKIIRIQGA FQDISEQKEA EARTLALEAQ LLTTLESITD
GFFLIDREWK FTFVNGQAER MLKRRREDLM GHTLWQELPE AVGARIEREY RLAAQAQHTT
RFEAFHQPLQ TWFAFHVYPT EAGLAVYFQD ITQRRAEQAQ LRLLETAVSR LNDMVVITEA
EAFSDAGPRI VFVNDAFERH TGYSREEAVG HTSALLWGPK TQQAELDRIR AAMKKWQAVR
AEIVVYTKAG QELWLETEVA PIADESGRFT HWVAVERDIT ERRQQQEEIL SLNGELEERV
LLRTAQLAAA NKEMESFAYS VSHDLRSPLN TIHGFSQLLA KAEAENISDK GKHYLDRIGV
GVKEMGELIE GLLTLAQLSR EQIKSEHVDL SAVARRIEQE HREREPQRQA QVLIQEGLCV
QGDPRLLSAV LQNLLANAWK FTSRQSLTRI EVGCERGSDG DTVFFVKDNG VGFDMAFSHK
LFGTFERLHS PGDFAGTGIG LATVKRVIDR HGGRVWAEGK LNEGAMFCFT LGQRSESAT
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