Gene Bpro_4276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4276 
Symbol 
ID4013039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4506790 
End bp4509129 
Gene Length2340 bp 
Protein Length779 aa 
Translation table11 
GC content62% 
IMG OID637943928 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_551066 
Protein GI91790114 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGGA CAGGCAGCTG CTCGATAACT TTGTCAGGCA CCGCGCAGGG CATCATTGAC 
CGCAAGCTCC CCGCCGAGGC CTTGTGCGCG GGCGGCATGG GTGACACACC ATTGCGCCTG
CTGGCAGACG CAATACCCCA GATCGTCTGG ATGATGCGGG CCGATGGCAG GTACACCTAC
TTCAATCGAC GGTGGTTTGA CTATTGCGGC TTGTCCCTGG AGGAGAGCCT GGACTGCGGC
TGGCCCGGCC TCGTTCATCC CGATGACGGC CCGCGAGTTG CGGAACTTTG GGCGCAGGCA
TTCAAGAGTG GCGAGACCTG TGAGGTCGAA TACCGTCTGC GCCGGGCCGA TGGCGTCTAT
CGCTGGATGC TGGGCCGGGC GGTTGTGCAA TATGATGCGG CGGGCCTGAC GGCCCACTGG
CTGGGTACCT TGACCGATAT TGACGACCTG AAGCAGGCCG CTGTTTCTCT GGAGAAAGAT
CTCTCCATGA ACCGCATCGC TGGCAGGGTT GCGCGCCTGG GGGGATGGAC GATTGAACTG
CCGGACCGCA CGCTGACCTG GTCGGATGAA AACTGCCTGA TTCACGACGT TGCGCCCGGC
TATCAACCGA CGCTGGAAGA GGGGATCAGC TACTTTCTCC CGGAGCATCG GCCGATAGTC
ATCCGTTATG TGCAGGACTG CGCGGAACAT GGCACGCCTT ACGAATTTGT GCTGCCCAAG
CTCACCGCCA AGGGCCGGCG CATCTGGGTG CGGTCCATTG GCGAGGCAGT GCGTGATGCC
ACCGGAAAGA TCATCCGCAT TCAGGGGGCC TTCCAGGATA TCTCGGAGCA GAAGGAGGCG
GAAGCGCGCA CGCTCGCGCT GGAGGCACAG CTCCTCACCA CGCTGGAGAG CATCACCGAC
GGGTTTTTCC TGATCGACAG GGAATGGAAG TTCACCTTCG TCAACGGTCA GGCAGAGCGA
ATGCTCAAGC GCCGCCGGGA AGACCTGATG GGCCATACGC TGTGGCAGGA ACTTCCCGAG
GCCGTGGGCG CGCGCATCGA ACGCGAATAC CGCCTGGCGG CTCAAGCGCA ACACACGACC
CGCTTTGAGG CTTTTCATCA GCCGCTGCAG ACCTGGTTTG CCTTCCACGT CTACCCCACC
GAGGCGGGGC TCGCGGTTTA CTTTCAGGAC ATCACCCAGC GGCGTGCAGA GCAGGCGCAG
CTGCGCCTGC TGGAAACGGC GGTTTCGCGC CTGAACGACA TGGTGGTCAT CACGGAGGCT
GAAGCCTTCA GCGATGCGGG TCCGCGGATT GTTTTTGTGA ACGATGCCTT TGAGCGGCAC
ACCGGCTACA GCCGGGAGGA GGCCGTTGGA CATACCTCGG CGCTTCTGTG GGGGCCCAAA
ACGCAGCAGG CCGAACTGGA CCGGATTCGC GCCGCGATGA AAAAGTGGCA AGCGGTACGC
GCGGAAATTG TCGTTTACAC CAAGGCCGGT CAGGAGCTCT GGCTGGAAAC AGAGGTCGCG
CCCATTGCCG ACGAGTCCGG CAGGTTTACC CACTGGGTGG CCGTCGAGCG CGACATTACC
GAGCGCCGGC AACAGCAGGA AGAAATTCTC AGTCTCAACG GCGAACTCGA GGAGCGGGTA
TTGCTGCGCA CAGCCCAGCT CGCAGCGGCG AACAAGGAAA TGGAGTCTTT CGCCTACTCC
GTGTCCCATG ACCTGCGCTC GCCCCTCAAT ACCATCCACG GATTCAGCCA GCTGCTCGCG
AAGGCCGAAG CAGAAAATAT CAGCGACAAG GGCAAGCACT ACCTGGACCG GATTGGTGTC
GGGGTCAAGG AGATGGGCGA GTTGATCGAG GGCCTGCTGA CCCTGGCCCA GCTGTCCCGC
GAGCAGATCA AGTCCGAGCA TGTCGATCTT TCGGCAGTCG CCCGGCGGAT CGAGCAGGAG
CACCGGGAGC GGGAGCCGCA GCGCCAGGCG CAGGTGCTCA TCCAGGAGGG CTTGTGCGTG
CAGGGCGACC CCCGCCTGCT GTCGGCCGTG TTGCAAAACC TGCTGGCCAA CGCGTGGAAG
TTCACTTCCA GGCAGTCGCT GACGCGGATT GAGGTGGGCT GCGAGCGGGG CTCCGATGGC
GACACCGTCT TTTTTGTCAA GGACAACGGT GTCGGATTTG ACATGGCCTT CTCGCACAAG
CTTTTTGGCA CCTTCGAGCG CCTTCATTCA CCGGGAGATT TCGCCGGGAC CGGCATCGGG
CTGGCCACCG TGAAGCGTGT CATCGACCGT CACGGCGGCC GTGTCTGGGC TGAAGGCAAA
TTGAACGAAG GCGCGATGTT CTGCTTTACC CTGGGTCAAC GCAGCGAATC GGCAACCTGA
 
Protein sequence
MNRTGSCSIT LSGTAQGIID RKLPAEALCA GGMGDTPLRL LADAIPQIVW MMRADGRYTY 
FNRRWFDYCG LSLEESLDCG WPGLVHPDDG PRVAELWAQA FKSGETCEVE YRLRRADGVY
RWMLGRAVVQ YDAAGLTAHW LGTLTDIDDL KQAAVSLEKD LSMNRIAGRV ARLGGWTIEL
PDRTLTWSDE NCLIHDVAPG YQPTLEEGIS YFLPEHRPIV IRYVQDCAEH GTPYEFVLPK
LTAKGRRIWV RSIGEAVRDA TGKIIRIQGA FQDISEQKEA EARTLALEAQ LLTTLESITD
GFFLIDREWK FTFVNGQAER MLKRRREDLM GHTLWQELPE AVGARIEREY RLAAQAQHTT
RFEAFHQPLQ TWFAFHVYPT EAGLAVYFQD ITQRRAEQAQ LRLLETAVSR LNDMVVITEA
EAFSDAGPRI VFVNDAFERH TGYSREEAVG HTSALLWGPK TQQAELDRIR AAMKKWQAVR
AEIVVYTKAG QELWLETEVA PIADESGRFT HWVAVERDIT ERRQQQEEIL SLNGELEERV
LLRTAQLAAA NKEMESFAYS VSHDLRSPLN TIHGFSQLLA KAEAENISDK GKHYLDRIGV
GVKEMGELIE GLLTLAQLSR EQIKSEHVDL SAVARRIEQE HREREPQRQA QVLIQEGLCV
QGDPRLLSAV LQNLLANAWK FTSRQSLTRI EVGCERGSDG DTVFFVKDNG VGFDMAFSHK
LFGTFERLHS PGDFAGTGIG LATVKRVIDR HGGRVWAEGK LNEGAMFCFT LGQRSESAT