| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4264 |
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| Symbol | hemE |
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| ID | 4013066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4495404 |
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| End bp | 4496513 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637943916 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_551054 |
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| Protein GI | 91790102 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.773676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCAC CACTTCAAAA CGACACCTTT CTGCGTGCCT GCCTGCGCCA GGCCACCGAC
TACACGCCCG TCTGGCTGAT GCGCCAGGCC GGCCGCTATT TGCCCGAATA CCGCGCCACT
CGCGCCCGTG CCGGCAGTTT CATGGGGCTG GCCACCAACA CCGATTACGC CACCGAGGTC
ACGCTGCAGC CGCTGGAGCG TTACCCGCTG GACGCCGCCA TCCTGTTTTC CGACATCCTG
ACCGTGCCCG ATGCCATGGG GCTGGGCCTG TCATTTGCGC TCGGCGAAGG CCCGCGCTTT
GCCACCCCCG TGCGCGACGA GGCGGCGGTA GCCCGGCTGG AGGTGCCTGA CATGGGCAAG
CTGCGCTATG TGTTCGACGC CGTCACCTCG ATCCGCAAGG CCCTCAACGG CCGGGTGCCG
CTGATCGGGT TTTCCGGCAG CCCCTGGACG CTGGCCTGCT ACATGGTCGA GGGAGCGGGC
TCGGACGACT ACCGGCTCGT CAAGACCATG CTGTACCAGC GCCCCGACCT GATGCACAAA
ATGCTGGCCG TCAACGCCGA TGCGGTGGCC GCCTACCTGA ACGCGCAGAT TGAGGCCGGC
GCCCAGGCCG TGATGATTTT TGACAGCTGG GGCGGCGTGC TGGCCGACGC GGCCTTCCAG
ACCTTCAGCC TGGCCTACAC CGCGCGCGTG CTGGGCCAGC TCAAGCGCGA GCACGATGGC
GTGAAGATTC CCCGCCTGGT CTTCACCAAA GGCGGCGGGC AGTGGCTGCA AGCCATGGCG
GCCCTCGACT GCGAGGTGCT GGGCCTAGAC TGGACCGTCA ACCTCGCCCA GGCCCGCGCG
CGGGTCGGCG AGAACGGGCC CCATGCCAAG GCCCTGCAAG GCAACCTGGA CCCGAACGTG
CTGTTTGCCA GCCCGGCCCA AATCGAAACC GAAGTGGCTG CCGTGCTGGA CAGCTTTGGT
CGACCCCATC TGGATAGCAG CCAGCCCGGA CCGACCCATA TTTTCAACCT CGGCCACGGC
ATCAGCCAGC ACACGCCACC GGAAAGCGTC GAAGTGCTGG TCAACGCAGT GCACACTCAC
TCTCGCAGCA TGCGCGCCGT CCGGACTTGA
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| Protein sequence | MFAPLQNDTF LRACLRQATD YTPVWLMRQA GRYLPEYRAT RARAGSFMGL ATNTDYATEV
TLQPLERYPL DAAILFSDIL TVPDAMGLGL SFALGEGPRF ATPVRDEAAV ARLEVPDMGK
LRYVFDAVTS IRKALNGRVP LIGFSGSPWT LACYMVEGAG SDDYRLVKTM LYQRPDLMHK
MLAVNADAVA AYLNAQIEAG AQAVMIFDSW GGVLADAAFQ TFSLAYTARV LGQLKREHDG
VKIPRLVFTK GGGQWLQAMA ALDCEVLGLD WTVNLAQARA RVGENGPHAK ALQGNLDPNV
LFASPAQIET EVAAVLDSFG RPHLDSSQPG PTHIFNLGHG ISQHTPPESV EVLVNAVHTH
SRSMRAVRT
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