| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4230 |
|---|
| Symbol | |
|---|
| ID | 4013105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4459092 |
|---|
| End bp | 4460819 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637943882 |
|---|
| Product | phospholipase D/transphosphatidylase |
|---|
| Protein accession | YP_551020 |
|---|
| Protein GI | 91790068 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCG CCGCCGCATC CAGCCGAGCA GGCCCCGCCT TCTCCCGGGC CTTTTTTGGA
GCCCGTTTAT CAGGCGGCGC ACGGTGGGCC TGCGCGCTGC TGTTGAGTTG CGGGATCAGC
GGCTGCGCGT CGCTGCCCAC CGAGGTCGAC AGGCCGGTCT CGCACGCCCT CGCCACCCCC
ACGGAAACCG CGCTAGGCCG GGCTGTCGAA GCCTGGGCCG CCAAGGCCGG CACCCGCAAC
GATTCCGGAT TTGCGCTGGT GGGCAGCGCC GAGCTGGCCT TTACCAGCCG CATGGCGCTG
ATCCAGGCGG CGCAAAAAAC GCTGGACATC CAGTACTACG CCATCTTTGC CGACGACACC
ACCCAGCGCA TGTTTGAGGC GCTGCGCGAA GCCGCCAACC GGGGCGTGCG CATCCGCATC
CTGCTGGATG ACTTCAACAC CTCCGGCAAG AACGCCCAGG TCCTGAAGCT GGCCTTTGAG
AAAAACATCG AACTGCGCCT GTTCAACCCC TTGCCCGGCG GCCGCAGCTC GTTGTTTTTC
CGGATCTTGA GCAACCTCAA GGACGTGGAC CGCATCCAGC GGCGCATGCA CAACAAGATT
TTCATCGCCG ACAACGCCGT GGCGATCACC GGAGGCCGCA ACCTGGGCGA GACCTATTTC
GGCCAGAGCG AAAACACCAA CTTTGTCGAT ATCGACATCC TGGCCGCCGG CCGCATCGCA
CGCGACCTGT CACGCAGCTT CGACCGATAC TGGAACAACC CGCAAGCCTA CCCGGTGCAG
TCGCTGATGA CCGCGAAGGA AATCGAGGCC CTCAAGCCAC AGGCCAGCAA CGCGGTAGCC
TCCCCCGGCG CCCTGCCCTC CAACCCGGAT AAAACCACGG TGGCGTCCGG CACTCCGACC
GCCGCCGCAG GCAGCGTCAA TCCAACCACC ACAGAGCGCG TCGTCACTTC ACCCGGCGGC
GCCACCACCA CCCTGCCCGC GCTGCCGGAA TCAACGAATT TAAGCCAGCT CACCTGGACC
TGGGCGCCCT CGGTGATGCT GGTGGACAAA CCGTCCAAAA TCGCCGCAGA TGCCGACAGC
ACCGAGGAGT CGCAGGACAC GGCCGTGGAC GGCCTGCTGC AACTCATGTC GCAGGCCAAA
ACCGACCTGC TGATCGTCAC GTCCTACTTT GTGCCGGGCC CTCGCATGAT GGAACAGCTG
GCCGCCATCC GCCAAAAAGG CGTCCGCATC CGCGTGCTGA CCAACTCGCT GGCGTCCAAC
GACGCACCGG CCGCGCACGT CGGTTATGCC CGCTACCGCA AGGCGCTGCT CGGCATGGGC
ATTGAACTGT ATGAAATGCG CGCCGAGCAG GAAGGCTCCA TCACCAGCTT CGGCTCATCC
GGGGGCTCCA CCGGCGGCTC GCGCGCCAGC CTGCATGCCA AAGTGGTGGT GATGGACGAT
CGCCTGCTGG TGGTTGGCTC GATGAACCTG GACCTGCGCT CCAAGCTGCA AAACAGCGAA
GTTGCCATCA TCATCCGCAG CCGCGCGTTG TCGCAGGATG CCACGCGCCT GATCGAGCCC
GCACTGGCGC GCAGCGCCTA CCGGGTGGAA CTGGTGGACG GCCAACTCGT CTGGCGCGCG
CCGCAAGGCT CCCAGCTGAA GGATTCGACC ACCGAACCGG ATGCCAGCCT GGGCCTGAAG
CTGATGCTCA AGCTGATCGG GCCGTTTGCA CCGGAGGAGA TGCTCTGA
|
|---|
| Protein sequence | MPTAAASSRA GPAFSRAFFG ARLSGGARWA CALLLSCGIS GCASLPTEVD RPVSHALATP
TETALGRAVE AWAAKAGTRN DSGFALVGSA ELAFTSRMAL IQAAQKTLDI QYYAIFADDT
TQRMFEALRE AANRGVRIRI LLDDFNTSGK NAQVLKLAFE KNIELRLFNP LPGGRSSLFF
RILSNLKDVD RIQRRMHNKI FIADNAVAIT GGRNLGETYF GQSENTNFVD IDILAAGRIA
RDLSRSFDRY WNNPQAYPVQ SLMTAKEIEA LKPQASNAVA SPGALPSNPD KTTVASGTPT
AAAGSVNPTT TERVVTSPGG ATTTLPALPE STNLSQLTWT WAPSVMLVDK PSKIAADADS
TEESQDTAVD GLLQLMSQAK TDLLIVTSYF VPGPRMMEQL AAIRQKGVRI RVLTNSLASN
DAPAAHVGYA RYRKALLGMG IELYEMRAEQ EGSITSFGSS GGSTGGSRAS LHAKVVVMDD
RLLVVGSMNL DLRSKLQNSE VAIIIRSRAL SQDATRLIEP ALARSAYRVE LVDGQLVWRA
PQGSQLKDST TEPDASLGLK LMLKLIGPFA PEEML
|
|---|
| |