Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4197 |
Symbol | |
ID | 4013139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4411534 |
End bp | 4416222 |
Gene Length | 4689 bp |
Protein Length | 1562 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637943844 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_550987 |
Protein GI | 91790035 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGCC GGATGACGCT GCGGACGCGC CTGGTCATGC TGGTGGTTGC GGCGATTGTC CCGCTGTTTG GCCTGTCCAT TTTCAAGGCC TGGGTCAACT CGGATGCGGC CATCAACCGG GCCACCGCCA ACCTGCAGTT TGCAGCTTCG CTGGTGGCCG CCAACCAGGA GCGGATGGTC GACTCAGCCC ACCAGCTGCT GATTTCGATC GCCAACGTCC CCGGCCTGAC CAGCGAAAAG TCCCTGGACT GCCAGCGGTA TTTCAAAACC TTGCGGGAAA ACTTTTCCAT CTACGCCAAC CTGGGCATCG TTGGCGTTGA CGGTTACGCG CGTTGCCACG GAGTCGACAG CAGTCAGCCG GCCTATCTGG GGGATCGCGA CTACTTTCGC GCCGCAGTAA CCCGCCGCAG TTTTGTCGCC GGCGACTACA TCCTGGGGCG ACTGTCGGGA AAACCCAGTA TCACGTTTGC ATTACCGGTG CTCGGCGCGG ACGGGCAGGT CTTGCGGGTT GTCTATGTCG CGGTCGATTT GACCGAGATG GCCAAGTCGG TTGCCGCCAT TCAGCTGCCA CCTGGTGCCG CGGTGGGCAT CCATGACCGC AACGGTGTGC TGCTGGCGAG CAAGCCCGCG CTTCCCATCA AGGTCGGACA AAAGGTTGCC AGTGTGGTGC TCCGCGAGGC CGTGCAGGCC AAGAGCACCG GGGTGCGCGA GGGGAAGGAT GCCTCGGGTG AGCTGCGGCT CTGGGCATTC ATGCCCAGCG GTGCCTCGGC AGACTCGGCC TTTTTTGTCG CAATCAGCAT CAACCGTGAC CTCGTGGTGG GGCCTGGCCA GCGTCAGCTG GGGCTTGAGT TGGCCGTGCT CGCGCTGGTG GCATTTCTCG GCGCCTGGAT TGCCTGGATG ATGGGCGGGC GCACCATCGT GAAGCCTACC CGGGAAATTC TTGACGCGAC CCGCTTGCTC CAGAAAGGCC AGCTGGATGT ACGCATCCCG ATGCATTCGG TTCATGACGC GGGTGAGTTC ACCAAAATTG CCGACGGTTT CAACGCCATG GCCGAGTCGC TCCAGCAGCG CGAGCAGGAC CTGGAGGCCG AGCTGGCGCG CAGCCAGCAG TCACGTGCCA CACTGGACCT GACGGTCAAC AGCATGCAGG AAGGCCTGAT CGCCGTGGAT GCCTTTGGCC GCCCGCTGCT GGTCAATGAA GCGGCCTCCC GGCTGTTTGT CCTGGCGCAG GCCCCGACGG TGTTGTCCGC CGAATGGCCG CAGCACCTCG GGCTGTATCT GCCTGGCGCT GACACCTTGT ACGCGTTTGA CCAATTGCCG CTCTACAAGG CTCTTCAGGG GCAAAGCGGT GGACCGCAGC ACATTCTGGT GCGCAATGCC GCCGTGCCTG CGGGGCGCCT GATCAGCTGC AGCTACCGGC CGATGCACGG CCGTGACGGT CTGGTGGGCG CGTTGATGGT GTTTGCCGAC ATTACGCAGC TGGAGCAGTT GCAGCTGGAG CGTGCAAAAA GCTATGCCGA GCTGCGCGAG ACCCAGCGCA AACTGCTGGA AGCGCAGCGG ATGGGCCGTA TCGGCAACTG GGAGTCTGAT TTCCGAACCG GGCAGCTTTG GTGGTCGGAA GAGGTTTACG CGCTGTATGG GCTGGCGCCC GGCACCGTCG AGCTCTGCAG TGATATGGCC ATGAGCATGA TGCATCCGGA AGACAGGGCG CGCTACGTTC AGGGCTACGA GCGCTCCGTT GGTGAGCGCG CAGAGTACGG TGTGGAGTTC CGCGTCATCA CGCCGGCCGG GGATGTCCGC TGGATGCACC AGCTGTGCAA GCCGCATTTC GACGAGACCG GGCAGGCGAT TTACCGCACC GGCGTGATCC AGGACATCAC GGCGCGCAAG CAGTCGGAAC TGGCGCTGGT TCATACCACC GACCTGTTGC GCCGCACCGG CGAGATGGCC ATGGTGGGCG GTTGGGAGCT GGTGCTTGAC GGCATGCGAT TGAGCAGTTC GGAGCAGGTT CTCCGGATTC ACGAGCTGGA GCCGGGTGCG CCTTGGGGGG CTGAAGACGC CATCAACTCC TATCCACCGG AGGCACGGAA AACTTTCATC GCAGCCGTCA ATGCGGCAAC CGGGCACGGC ACCCCTTGGG ACCTGGAGTT GCCCATGATC ACGCAGACCG GCCGGCGCAT CTGGGTGAGG ACGCAGGGCC AGGCCTTCAT GCAGGATGGC AAGGTGGTGC GGCTCGCCGG CGCCTTGCAG GACATCACTG CGCAACATGA GTCGCGTGAG CACCTGCGCC TGCTGGAGTC CAGCATTTCA CGCCTCAACG ACATGGTGGT GATCACCGAG GCCGTGCCCT TGGGCGAGCC CGGGCCCCGC ATTGTCTTTG TCAACGACGC CTTCGTGCGC CGCACCGGTT ACAGCCGCGA GGAAGTGCTG GGCAAGACGC CGCGCATTTT GCAGGGCCCC CAGACCCAGC GGGCCGAACT CGATCGCATC GGTGCAGCAC TCAGGGCGTG GCAGCCGGTC CAGGCCGAGC TGGTCAATTA CACCAAGAGT GGCGAGCCGT TCTGGCTCGA CCTCGACATC GTTCCCGTTG CGGACTCCCA GGGGGGCTTC ACGCACTGGG TGGCGGTCGA GCGGGACATC ACACAGCGCA AGCTGGCCCA GCAGGCGCTC GTCGAGAGCG AGCAGCGTTA CGCCGCGCTG TTTGAGGGGG CACCGGTGCC GATGTGGATT GTCGACGACC AGACGCATGC CTTTTTGGCG GTCAATGGGG CGTGCACCGA GCGCTACGGC TACACGCGGG AAGAACTCCT GAGCATGACG ATTTTTGATA TCCGTTCGGA TATTGAAGCC CAGCGCTTGA AGGCCGAAAT CGCCAGCGGC GCCCACAAGC CCGTCAACCG CCGCGTGCAC CGATCTAGGG ACGGCGCCGA CCTCGATGTC GAGACGGTTT CCCGCAAGAT CCAGTACGAA GGCAGACCGG CGCGGCTGGT GGTTGCGTTC GACGTGAGCG CGCAGGTGAA AGCCGAAAAG GATGCCCAGG AATACCTGTT CACCCTGCAG CGCGCCGCCG ACGCCGCCTC GGCCATCACC TGGCACCAGA CGCTGGATGG CACGATGCAG GAAGTTGCGG AGCAGGTCCG GGGGGTGATT GGTACCCATC AGGCGGCGGT GAGCCTGACC ATCAACAGCG ACTGGGCGCA GGCTGTCCAT GCGCTGTCCT TGTCCGAGAA ATATGCGGCA TACCGTGACC TGATGGAGCC GCCGGACGGC ACCGGCATTT ACGCCGTGGT CTGCGAGGCC AACCGGTCCA TGCGGCTGAC CCAGGCCGAG CTGGAGGCGC ACCCGCGCTG GCGCGGCTTT GGCAGCCATG CCGGCAAGCA CCCCGCGATG CGCGGCTGGC TCGCGGTACC CTTGGTGGCC CGGAGCGGAA AAAACATGGG CTTGCTACAG CTCTCGGACA AATACGAGGG CGAGTTCACC CAGCAGGATG AATATGTGGC AATGGAGTTG GCGCAGCTCG CTTCCATCGC CATAGAAAAT GTCCAGCTGC TGGAAGAAGT GGGTCGGCTC AATGCGGGGC TGGAACAAAA AGTCGCGGAG CGCACCGCTG CGCTGACCCG ACAGGAGGCC CTGTTCCGTG CCCTGGCCGA GCGGGCGCCC CAGGTGATCT GGACCGCCGA CCCCAGCGGC GCTCCAACCT ATTACAACCA GGCCTGGTTT GACCTGGTGG GTGGCCGGTT TAGCGACTGG GCGGGCTCGC GCTGGCTTAC GGCTATCCAT CCGGAAGACC TGCCCGAAGT CCAGGCGAGC TGGCAGCTGG CCAGTGCCAG CCGGTCGCAG TATGAGAACA TCCGCCGCCT GCGCGCCAGG GACGGCAGCT ACCACACCAT GTCTTCCCGG GCCACCCCGG TGCTTGACGA GCGGGGCGAA CTGGCCTACT GGGTGGGCAT TGATGCGGAC ATCACCGAGA TCAAGACCAT CGAGGCCGCC TTGCGCCTGT CAAACCAGGA GCTTGAGGCC TTCTCGTATT CTGTCTCCCA CGACCTGCGC TCGCCGCTTA ACACCATTGA CGGGTTCAGC CGCCTGCTGT CCAAGCAGCT CCCCGGCCAT GTCAACGAGA AGAGCCGGCA CTACCTGGCG CGCATCCAGA CGGGTGTGGC GCAGATGGGG CAACTGATTG AAGATTTGCT CTCGCTGGCA CAGGTATCAC GCGCGCAGTT ACGGGCTGAG CTGGTGGACC TGTCGGCGCT GTCCCGCCGG ATTCTGGGTG AGTGGCAGGC GCGCGACCCC GAACGCCGGG TCGTGGTTCA TGTTGAAAGC GGTCTGCAGG CGCATGGCGA CTCGCGGCTT GTGGGTGTGG TGATGGAAAA CCTGCTGAGC AATGCCTGGA AGTTCACCTC GCGCAAAGTC GGGGCGAGCA TCAGCGTCAC CCAGCAACCC GACGCAGCAG GGCAGCCGGT CTTCGTGGTC CGGGATAACG GCGCCGGCTT CGACATGGCG TATGCCGACA AATTGTTCAA CCCGTTTCAG CGCTTGCATG CGGCCTCGGA GTTTGCCGGC ACCGGCATCG GGCTGGCCTC GGCCAGCCGC GTGATCGGCA GGCACGGCGG GCGGCTGTGG GCGCAATCCG AGCCCGGTTG CGGGGCTGCT TTTTTCTTTA CCCTGCCCAG GACCGCTATT GCGGTCTGA
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Protein sequence | MTGRMTLRTR LVMLVVAAIV PLFGLSIFKA WVNSDAAINR ATANLQFAAS LVAANQERMV DSAHQLLISI ANVPGLTSEK SLDCQRYFKT LRENFSIYAN LGIVGVDGYA RCHGVDSSQP AYLGDRDYFR AAVTRRSFVA GDYILGRLSG KPSITFALPV LGADGQVLRV VYVAVDLTEM AKSVAAIQLP PGAAVGIHDR NGVLLASKPA LPIKVGQKVA SVVLREAVQA KSTGVREGKD ASGELRLWAF MPSGASADSA FFVAISINRD LVVGPGQRQL GLELAVLALV AFLGAWIAWM MGGRTIVKPT REILDATRLL QKGQLDVRIP MHSVHDAGEF TKIADGFNAM AESLQQREQD LEAELARSQQ SRATLDLTVN SMQEGLIAVD AFGRPLLVNE AASRLFVLAQ APTVLSAEWP QHLGLYLPGA DTLYAFDQLP LYKALQGQSG GPQHILVRNA AVPAGRLISC SYRPMHGRDG LVGALMVFAD ITQLEQLQLE RAKSYAELRE TQRKLLEAQR MGRIGNWESD FRTGQLWWSE EVYALYGLAP GTVELCSDMA MSMMHPEDRA RYVQGYERSV GERAEYGVEF RVITPAGDVR WMHQLCKPHF DETGQAIYRT GVIQDITARK QSELALVHTT DLLRRTGEMA MVGGWELVLD GMRLSSSEQV LRIHELEPGA PWGAEDAINS YPPEARKTFI AAVNAATGHG TPWDLELPMI TQTGRRIWVR TQGQAFMQDG KVVRLAGALQ DITAQHESRE HLRLLESSIS RLNDMVVITE AVPLGEPGPR IVFVNDAFVR RTGYSREEVL GKTPRILQGP QTQRAELDRI GAALRAWQPV QAELVNYTKS GEPFWLDLDI VPVADSQGGF THWVAVERDI TQRKLAQQAL VESEQRYAAL FEGAPVPMWI VDDQTHAFLA VNGACTERYG YTREELLSMT IFDIRSDIEA QRLKAEIASG AHKPVNRRVH RSRDGADLDV ETVSRKIQYE GRPARLVVAF DVSAQVKAEK DAQEYLFTLQ RAADAASAIT WHQTLDGTMQ EVAEQVRGVI GTHQAAVSLT INSDWAQAVH ALSLSEKYAA YRDLMEPPDG TGIYAVVCEA NRSMRLTQAE LEAHPRWRGF GSHAGKHPAM RGWLAVPLVA RSGKNMGLLQ LSDKYEGEFT QQDEYVAMEL AQLASIAIEN VQLLEEVGRL NAGLEQKVAE RTAALTRQEA LFRALAERAP QVIWTADPSG APTYYNQAWF DLVGGRFSDW AGSRWLTAIH PEDLPEVQAS WQLASASRSQ YENIRRLRAR DGSYHTMSSR ATPVLDERGE LAYWVGIDAD ITEIKTIEAA LRLSNQELEA FSYSVSHDLR SPLNTIDGFS RLLSKQLPGH VNEKSRHYLA RIQTGVAQMG QLIEDLLSLA QVSRAQLRAE LVDLSALSRR ILGEWQARDP ERRVVVHVES GLQAHGDSRL VGVVMENLLS NAWKFTSRKV GASISVTQQP DAAGQPVFVV RDNGAGFDMA YADKLFNPFQ RLHAASEFAG TGIGLASASR VIGRHGGRLW AQSEPGCGAA FFFTLPRTAI AV
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