| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4139 |
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| Symbol | |
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| ID | 4013194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4345838 |
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| End bp | 4351912 |
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| Gene Length | 6075 bp |
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| Protein Length | 2024 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637943786 |
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| Product | UvrA family protein |
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| Protein accession | YP_550929 |
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| Protein GI | 91789977 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.79148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGACC TCTTCAGGAA AGACCCAGCA ATGTCCCAGG GAACCATCCG CATCCGCGGC
GCGCGCCAGC ACAACCTCAA AAATCTTGAC CTGGATATCC GCACCGGGGA GCTGACGGTG
GTCACCGGCC CCAGTGGTTC GGGAAAGTCC TCGCTGGTGT TCGACACGCT GTTCGCCGAA
GGCCAGCGCC GCTATGTCGA GACGTTCTCG GCCTACGCCC GGCAGTTTCT GGACCGCATG
GACAAGCCCG CTGTCGACAA GGTGGAGGGC GTGCCGCCGG CCATTGCAAT CGACCAGAGC
AACCCGGTGC GCAGTTCGCG CTCCACCGTG GGCACGATGA CGGAGCTCAA TGACCACCTG
AAGCTCTTGT ATGCCCGCTC CGCCCAGCTG TTTGACAAAC AGACGGCACA GCTGGTGCGC
CATGATTCGC CGGAATCGAT TTATGCGGGA CTGATGGCGC GCACGGCAGC CGTGGAGCAA
GCCCAACTTT CGGCAGCGCC ACCCCAGCGA GAATTAGCCC CTCTTCATGA TGAAAGGGGC
AGCGCAACGC CGGAGGCACG CGAAGCGACA AGCGTGGGGG TCCGTCTTGT GATGACCTTC
CCGGTCGAGC TGCCCGGCAA CACCAGCGCT GAAGAGGTGA CGCAATGGCT GTCCGCCAGC
GGCTTCACGC GGGTGCATGC CGAGCGGCAG ATCAGCACAC CGGCCGGCCC GCACAAGCTG
CTCGACGTGG TGGCTGACCG CTTTCGCATC CAGACCACCG AAAAAGTCCG GGCGATTGAA
GCCATCGAAA TGGCGCTGAA ACGCGGCGGC GGCCGGCTCA ATGTGTATGT GATGGGCGCA
GGCCCCGCGT CGCCCTCTTC CGCCACGCCC GAAGAGATGT GGCGCTTCTC CACCGGCCTG
CATTGCCCCG ACAGCGACAC GCGCTACACC GACCCGACAC CGTCGCTGTT TTCCTTCAAT
TCGGCCATGG GCGCCTGCGA GACCTGCCGC GGCTTCGGCC GGGTCATCGG CGTCGACTAC
GGGCTGGTGA TACCCAACGA CAAGCTCACG CTGCGCGCCG GCGCCATCAA GGTCATGCAG
ACGCCGGCGT GGCAGGAAGC GCAGGACGAT TTGATGCGCC ATGCCGAAAC GGCCGGCATT
CCACGCGACA CACCCTGGTA CAAGCTCACG CCCGAGCAGC AGGCCTGGGT GATCAACGGT
TCGCCGAGCT GGAACGGCAA ATGGAACCAG CACTGGTTCG GCATCAAGCG CTTCTTTGCC
TACCTGGAAA GCAAGGCCTA CAAAATGCAC ATCCGTGTGC TGCTGTCCAA GTACCGCAGC
TACACCCAGT GCGAGACCTG CGGCGGCGCG CGCCTCAAGC TGGAGTCGCT GCTCTGGCGG
CTTGGCTCCA AAGAGGCTGC CGATGCGGTG CTGCCGCCTG GCCAGCGCTT CATGCCGGTG
GGCGTGCAGT GGAGCCGCCA GCAGCTCGAA GCCTTGCCGG GCCTGTGCCT GCATGACCTG
ATGCGCCTGC CGATTGACCG CCTGCAGAAA TTCTTTGCCA GCCTGTCGCT GGCCGCCGAA
GGGGACGATG CGGAACAGAA GGCCCTCAAA CTGCTGTTCG AGGAAATCCA GACCCGCGTG
AAATACCTGT GCGATGTCGG CATTGGCTAC CTCACGCTGG ACCGGCAAAG CCGCACGCTG
TCGGGTGGCG AGGTGCAGCG CATCAACCTC ACCACCGCGC TGGGCACCTC GCTGGTCAAC
ACGCTGTTCG TGCTCGATGA GCCGTCCATC GGCCTGCATC CGCGCGACAT GAACCGCATC
ACCCAGGCCA TGCACCGGTT GCGCGATGCC GGCAATACGC TGGTGGTGGT GGAGCATGAC
CCCGCCGTGA TGCTGGCGGC CGACCGCATG ATAGACATGG GACCCGGCCC GGGCGAGAAG
GGCGGGCAGA TCGTGTTTGA CGGCACGCCC GAGGACCTCC GGCACGCCGA CACGCTGACC
GGCGCCTACC TGGGCTCGCG CAAGCGGGTG GGCCTGGGGC TCAAGCGCGC GGTGAGCGAC
AACACTCCGC GCCTCATCCT CGAAGGCGCC CGCGACCACA ACCTGAAAAA TCTGACGGTG
GAGTTCCCGC TGCAGCGCCT GGTGTGCGTC ACCGGTGTCA GCGGCTCCGG CAAGTCCACG
TTGATGCAGG ACATCCTCGC GCCCGCCTTG CTGCGCCAGT TTGGCAAGGC CACGGAAACG
CCGGGCCTGC ATGACCGGCT CATGGGGGCC GACCACCTGA CCGACGTGGT GTTTGTCGAC
CAGTCGCCCA TCGGCAAGAC GGCGCGCTCC AACCCCGCGA GCTATGTAGG CGCTTGGGAT
GCGGTGCGCG AACTGTTTGC CCAGTCACCG CTGGCCAGGC AGCGCAGCTA CACCGCCACC
AAATTCAGTT TCAACAACGG CGACGGGCGC TGCCCGACCT GCGGCGGCTC GGGCTTCGAG
CATGTGGAGA TGCAGTTTTT GAGTGACGTG TACCTGCGTT GCCCCGACTG CGACGGCAAG
CGCTACCGGC CGGAAATCCT GGAGGTGACG ATTGAGCGCA AGGCCATCGG CCAGCTCAAG
CCGGTGCTGA TGAATGTGTC CGATGTGCTG GAGCTGACGG TCAGCGAAGC CGTGCAGCTG
TTCGCGCAGG ACCGCGAAGT GCTGCGCGCG CTGCAGCCCA TCGTGGATGT GGGCCTGGAG
TACGTGAAGC TGGGCCAGCC CGTGCCCACG CTGTCGGGCG GCGAGGCGCA GCGCCTCAAG
CTGGCTGGCT TTCTGGCCGA AGCCTCGAGG ACGGCAAGCA AGAGCAGTGC AAGCAAGCAG
GCGCTGGCGC TCAAGCACCC GGGCCGCGGC ACGCTGTTCC TGTTTGACGA GCCGACCACC
GGCCTGCACT TTGACGACAT TGCCAAACTC ATGCGCGCGC TGCGCAAGCT GATGGATGCG
GGCCATTCGC TGATCGTCAT TGAACACAAC CTGGATGTGA TTCGCTCGGC CGACTGGCTG
ATCGACCTCG GGCCCGAGGG CGGCGAGGGG GGCGGCCTGC TGGTGGCCCA AGGTACGCCC
GAAGAGGTGC GCCAGCACCC GACCTCGCAC ACCGCCAAGG CGCTGCGCGA GTACGAGCTG
GCCATGGGCC AGGTGCATGG CGTGGAAGAG GTCCGGCCCA AGGCCTGGAC CACGCGGCCG
GCCTTCTCCA ACCTGATCCA GATCGTCAAC GCCAAGGAAA ACAACCTCAA GAGCCTGTCG
GTCGACATTC CGCGCGGCAA GTTCAATGTG GTCACCGGCG TGTCAGGCTC GGGCAAGTCC
ACGCTGGCCT TTGACATTTT GTTCAACGAA GGTCAGCGGC GTTATCTCGA GTCGCTCAAT
GCCTATGCGC GCAGCATCGT GCAGCCGGCC GGGCGGCCTG AAGTTGATGC GGTGTACGGC
ATTCCGCCCA CCGTGGCCAT CGAACAGCGC CTGTCGCGCG GCGGGCGCAA GTCCACCGTG
GGCACCACCA CCGAGGTCTG GCATTTCCTG CGCCTGCTGT ATGTGAAGCT GGGGGTGCAG
CATTGCACCA AGGACGGTGC GGCGGTGATG CCGCAGAGCC CGGAGAGCAT CGCGGCCCAG
TTGCTCAAGA CCTACCGCGG CCAGCACATC GGCCTGCTGG CGCCGCTGGT GATTGCCCGC
AAGGGCGTCT ACACCGAGTT GGCCGACTGG GCCCGGCCGC GCGGCTATAC GCATTTGCGC
ATCGACGGCG AGTTTTTGCC GACCACCGGT TTTCCGCGCA TTGACCGCTT CAAGGAGCAC
ACGGTCGAGC TGCCGGTGGC GGACATCCAC GTCACGCCCG AGAACGAAGC CGCGCTGCGG
GTTGCGCTGG CCACTGCACT GGAGCATGGC AAGGGCGTGG TGCATGTGCT GGCCCCGCTG
GACGGCCTGC GCGGCGCGAT GATGGCGGGC GCCTCCACCA AGGGCCTGGG CCGGCTGGAG
GCCTTCTCCA CCAAGCGCGC CTGCCCGGTC TGCTCGACGT CTTACCCCGA ACTCGATCCG
CGCCTCTTCA GCTACAACAG CAAGCACGGC TGGTGCCCCG ATTGCGTGGG GACGGGCGTC
AAGCTCAGCA AGGAGCAGCG CAAGGTGTTT GACGACTCGG TGCGCGACGA CGACAACAAG
GGCCGCGAGC AGACTTTTGG CGAGCCGGAG GTCGACGATG TGGTCGATGC CGCTTGCCCC
ACCTGCGAAG GCACGCGCCT GAACAAACAG GCGCGCGCGG TGAAATTTGC CGGTGTGGGC
ATTGCCGACA TCGCCGGCCT GTCGGTGACG GATGTTCGCC GCTGGGTTGA AAAACTGGCG
CTGGCAGGCC GCGAGGCCGG CATTGCCCGC GACCTGGTGC CCGAAATCAA AAGCCGGCTG
GAGTTTCTCG AGGACGTGGG CCTGGGCTAC CTCACGCTGG ACCGCGGCGC GCCCACGCTG
TCGGGCGGCG AAGCCCAGCG CATCCGGCTG GCGGCGCAAC TGGGGTCCAA CCTGCAGGGC
GTCTGCTACG TGCTCGACGA GCCCACCATC GGCCTGCATC CGCGCGACAA CCAGATCCTG
CTCAGCGCGC TGGGCAAGCT CAGCGACCGC GGCAACACGC TGGTGGTGGT GGAGCACGAC
GAAGACACGA TACGCCGTGC CGACAACATC ATCGACATCG GGCCCGGCGC GGGCAAGCGC
GGCGGGCAAC TGGTGGCCCA GGGCACGGCG GCGCAATTGT CTGCGGTGCC GGAGTCGCTG
ACCGGCCGCT ACCTCGCACA CCCGCTGATC CATCCGCTGC ATGCCCGCCG CGAAACGGAG
AAGCCCCTCA CCCCAGCCCT CTCCCCAGAG GGGCGAGGGA GCGAAACGGG CTTGCTCCCT
CTCCCTCTGG GAGAGGGCGG GGGTGAGGGC TCCCCTGCCA AGCCCCTGAG CAAACAAAAG
CAGGCCGCGC TGAAAGCCGC AGCATTGAAG GCGGCCGCAG CAAGCGCCAG TGCGCTGCAC
AACGCCGCAC CCGCTGCCGC GAGCAAATTC ACCTCCTGGC TCACCGTGGT CAATGCCGGC
CTGCACAACC TCAAGAGCGT GTCGGTCGAT GTGCCGCTGT ACCGGCTGGT GGCGGTCACC
GGCGTGTCGG GCTCCGGCAA GTCCACGCTG GCGCGCGACG TGCTGCTGAC CAATGTGCAT
GCGGGCGTGA TGCTGCGCTC CACCAAGGCC GGGCGCGATG CTGACGACAA GGGCAAGACG
CCTGACTGGG CGGGCTGCGA GCGCATCGAG GGCTACGCCG CGGTGGACCG CGTGCTGGAA
GTTGATCAGA CACCCATCGG CAAGACGCCG CGCTCCTGCC CGGCCACCTA CATCGGTTTC
TGGGACACGA TTCGCAAGCT GTTTGCCGAC ACGCTGGAAG CGCGGGCGCG CGGCTACGGG
GCCGGGCGCT TCAGCTTCAA CACCGGCGAG GGGCGCTGCC CGACCTGCGA GGGCGCCGGT
GTGCGCACCA TCGGCATGAG CTTTCTGCCC GACGTGAAGG TGCTGTGCGA GACCTGCCAC
GGCGCGCGCT TCAACCCCGA GACGCAGGCC GTGACCTGGC GCGGCAAAAG CATAGGCGAC
GTGCTGAAAA TGGAAGTGGA TGAGGCGGTG GCGTTTTTTG CCTCCATGCC CAGCATTGCC
CACCCGTTGC AGCTGCTCAA GGATGTGGGC CTGGGCTACC TCACGCTGGG CCAGCCTTCG
CCAACGCTGT CGGGCGGCGA GGCGCAGCGC ATCAAGCTGG TGACGGAGCT GAGCAAGGTG
CGCGACGACA TCACGCGGCG CGGCCAGAAG GCGCCGCACA CGCTGTACGT GCTGGACGAG
CCCACGGTGG GCCTGCACAT GGCCGACGTG GAAAAGCTGA TTCACGTGCT GCACCGCCTG
GTCAACGGCG GCCACAGCGT AGTGGTCATC GAGCACGACC TGGACGTGGT GGCTGAGGCC
GACTGGGTGA TTGACCTGGG TCCCGATGGC GGTGACGCCG GTGGGCAGGT CGTCGCCTCG
GCGCCGCCGG AGGCTGTCGT GAAGCTGGGC ACGCACACCG GGAATGCGTT GCAAAGTGTG
CTGGCGAGGG TGTAA
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| Protein sequence | MFDLFRKDPA MSQGTIRIRG ARQHNLKNLD LDIRTGELTV VTGPSGSGKS SLVFDTLFAE
GQRRYVETFS AYARQFLDRM DKPAVDKVEG VPPAIAIDQS NPVRSSRSTV GTMTELNDHL
KLLYARSAQL FDKQTAQLVR HDSPESIYAG LMARTAAVEQ AQLSAAPPQR ELAPLHDERG
SATPEAREAT SVGVRLVMTF PVELPGNTSA EEVTQWLSAS GFTRVHAERQ ISTPAGPHKL
LDVVADRFRI QTTEKVRAIE AIEMALKRGG GRLNVYVMGA GPASPSSATP EEMWRFSTGL
HCPDSDTRYT DPTPSLFSFN SAMGACETCR GFGRVIGVDY GLVIPNDKLT LRAGAIKVMQ
TPAWQEAQDD LMRHAETAGI PRDTPWYKLT PEQQAWVING SPSWNGKWNQ HWFGIKRFFA
YLESKAYKMH IRVLLSKYRS YTQCETCGGA RLKLESLLWR LGSKEAADAV LPPGQRFMPV
GVQWSRQQLE ALPGLCLHDL MRLPIDRLQK FFASLSLAAE GDDAEQKALK LLFEEIQTRV
KYLCDVGIGY LTLDRQSRTL SGGEVQRINL TTALGTSLVN TLFVLDEPSI GLHPRDMNRI
TQAMHRLRDA GNTLVVVEHD PAVMLAADRM IDMGPGPGEK GGQIVFDGTP EDLRHADTLT
GAYLGSRKRV GLGLKRAVSD NTPRLILEGA RDHNLKNLTV EFPLQRLVCV TGVSGSGKST
LMQDILAPAL LRQFGKATET PGLHDRLMGA DHLTDVVFVD QSPIGKTARS NPASYVGAWD
AVRELFAQSP LARQRSYTAT KFSFNNGDGR CPTCGGSGFE HVEMQFLSDV YLRCPDCDGK
RYRPEILEVT IERKAIGQLK PVLMNVSDVL ELTVSEAVQL FAQDREVLRA LQPIVDVGLE
YVKLGQPVPT LSGGEAQRLK LAGFLAEASR TASKSSASKQ ALALKHPGRG TLFLFDEPTT
GLHFDDIAKL MRALRKLMDA GHSLIVIEHN LDVIRSADWL IDLGPEGGEG GGLLVAQGTP
EEVRQHPTSH TAKALREYEL AMGQVHGVEE VRPKAWTTRP AFSNLIQIVN AKENNLKSLS
VDIPRGKFNV VTGVSGSGKS TLAFDILFNE GQRRYLESLN AYARSIVQPA GRPEVDAVYG
IPPTVAIEQR LSRGGRKSTV GTTTEVWHFL RLLYVKLGVQ HCTKDGAAVM PQSPESIAAQ
LLKTYRGQHI GLLAPLVIAR KGVYTELADW ARPRGYTHLR IDGEFLPTTG FPRIDRFKEH
TVELPVADIH VTPENEAALR VALATALEHG KGVVHVLAPL DGLRGAMMAG ASTKGLGRLE
AFSTKRACPV CSTSYPELDP RLFSYNSKHG WCPDCVGTGV KLSKEQRKVF DDSVRDDDNK
GREQTFGEPE VDDVVDAACP TCEGTRLNKQ ARAVKFAGVG IADIAGLSVT DVRRWVEKLA
LAGREAGIAR DLVPEIKSRL EFLEDVGLGY LTLDRGAPTL SGGEAQRIRL AAQLGSNLQG
VCYVLDEPTI GLHPRDNQIL LSALGKLSDR GNTLVVVEHD EDTIRRADNI IDIGPGAGKR
GGQLVAQGTA AQLSAVPESL TGRYLAHPLI HPLHARRETE KPLTPALSPE GRGSETGLLP
LPLGEGGGEG SPAKPLSKQK QAALKAAALK AAAASASALH NAAPAAASKF TSWLTVVNAG
LHNLKSVSVD VPLYRLVAVT GVSGSGKSTL ARDVLLTNVH AGVMLRSTKA GRDADDKGKT
PDWAGCERIE GYAAVDRVLE VDQTPIGKTP RSCPATYIGF WDTIRKLFAD TLEARARGYG
AGRFSFNTGE GRCPTCEGAG VRTIGMSFLP DVKVLCETCH GARFNPETQA VTWRGKSIGD
VLKMEVDEAV AFFASMPSIA HPLQLLKDVG LGYLTLGQPS PTLSGGEAQR IKLVTELSKV
RDDITRRGQK APHTLYVLDE PTVGLHMADV EKLIHVLHRL VNGGHSVVVI EHDLDVVAEA
DWVIDLGPDG GDAGGQVVAS APPEAVVKLG THTGNALQSV LARV
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