| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4128 |
|---|
| Symbol | |
|---|
| ID | 4013222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4333957 |
|---|
| End bp | 4334682 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637943776 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_550919 |
|---|
| Protein GI | 91789967 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.860792 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCA AAGCAAAAGA AGCCAGGCCC CGGCCCACGC GCAACGACGC GCAGCGCCAG
TCCATCCTGG ACGCGGCGTC CCTGCTGTTT ATCGAAAAAG GTTTCGGCGG GACCAACATC
AATGACATCG CGGACGCGGT CGGTGTGAGC CGAACGGCGC TTTATTACTA CTTCCCCAGC
AAGGAGTCGA TGCTGGAGGC GCTGACCGAA GAAGTTACCG AAAAAGCCAG CCTGCTCGCC
GCCAGTGTTT CGGAGCGCGA TCTCCTGCCA CCGCGGGATG CGCTGCGGCA GCTGATCCTG
CAGCATGCGG GCCTCATCCT TTCGCATCCG CTGCAGTTCC GGGTGGTGGA GCGCAGCGAG
AGCAACCTGC CCGAGCCGCA CCGGTCGGCG GCCGAGGCGG CCCGCCGCGC GGTGCTGGAC
CACTTTGTGC GCGTGATACA GCGCGGGATC GACGAAGGCC AGTTTCGCGA CACCAACGCC
CATATCGCCG CGTTTTCGAT CATCGGCATG TGCAACTGGT GCGCCTGGTG GTTCGACGCC
AAGGGCAATG TGCCGGCCAG CGGCGTGGCC GAGTCCATCG CCGACTTCAG CCTGCGCGCG
CTGTTGCCTG ACCACGCGCA ACGCGCACGT GCGGGGTCGG CGGAAGAGGC GGTCAGCCAG
ATGCGGGACG CGCTGACCGC TTTCGACAAC CACCTGAAAA AGAAGCCGTC CCGGCATTCG
GGTTAA
|
|---|
| Protein sequence | MTSKAKEARP RPTRNDAQRQ SILDAASLLF IEKGFGGTNI NDIADAVGVS RTALYYYFPS
KESMLEALTE EVTEKASLLA ASVSERDLLP PRDALRQLIL QHAGLILSHP LQFRVVERSE
SNLPEPHRSA AEAARRAVLD HFVRVIQRGI DEGQFRDTNA HIAAFSIIGM CNWCAWWFDA
KGNVPASGVA ESIADFSLRA LLPDHAQRAR AGSAEEAVSQ MRDALTAFDN HLKKKPSRHS
G
|
|---|
| |