Gene Bpro_4092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4092 
Symbol 
ID4013225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4300760 
End bp4301962 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content65% 
IMG OID637943740 
Productputative threonine aldolase 
Protein accessionYP_550883 
Protein GI91789931 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.87338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAT CCCCGCACAC CATGAGTACA TCGTCGTCCC GTTTGTCCGA CCTGATAGGC 
AAGCCCGTCA CCGAGGTCGA TACACCCGCC CTCGTCATTG ACCTGGACGC GATGAAGCGC
AACCTGGGGC GCATGGCCGA GTTTGCGAAA AAGCACAGCA TTCGCTGGCG TCCCCATGCC
AAGATGCACA AGAGTGCGTC ACTCGCCAAA CTGCAGATCA AGGCCGGCGC GGTGGGCGTG
TGCGTGCAAA AGACTGCCGA GGCCGAGGCC ATGGTGGCCG GCGGGGTGTA CGACGTCTAC
ATCAGCAACG AGGTCATTGC GCCTGCCAAG CTCGCACGGG TGGCGGCACT GACGCAGAAG
GTCGCGCCCC ATAGCGGCAA GCTGGCCATT GCGGTGGACA GCACCCAGGG CGTAAACCGG
CTGGCGCAGG CCATGAACGA GGCCAGGGCC AGCAGCGGCG TGAGCACGAT CATTGACGTG
TTCGTCGAAA TCGACGTCGG ACAGGGCCGC TGTGGTGTGG AGCCTGGAGC CGCCGCGGTG
ACGCTGGCGC TGGAGATCCG CAAACACCCG GCCCTGCACT TTGCCGGCCT GCAGGCCTAC
CATGGCAAGG CCCAGCATAT TCGCAGCGCG CAGGAGCGGC GCGACGCGAT TGCCCAAGCC
GCAGCCGCCG TGCAGCGCAC GCGCGACCTG ATCGAAGCCC AGGGCATCAC AGTCGGCCTG
GTCACCGGCG GCGGTACCGG CAGTTTTGTG CTGGAGGCCG CCAGCGGCGT TTACGGCGAA
TTGCAGGCGA GCTCCTTCAT GTTCATGGAT GTCGACTACG CGAAAAACGA GCGCGACCCG
GCGCAGCCGC AGTTCGAGCA CGCCCTGTTT GTCAAGACAC AGGTCATCAG CACCCGCAGC
GGCCATGCCG TGTGCGACGC CGGCCACAAG AGTCACGCCA TCGATTCCGG CCTGCCGCTG
GTGCATACCC TGGATGGCGA GGATGCGCTG GAGTACTTCA ACGGCGGTGA TGAGCATGGC
ATCTTGCGGC CCGCTGCGGG CGGCACGCGC CTGCCGGGGC TGGGCCACAT CCTGTGGCTG
ATTCCCGGCC ATTGCGACCC GACCGTCAAC CTGCACGATG TGATGATTGC GGTGGGCGGT
GGCCTGCGCA GGGGCATTGT GCAGCGCATA TTCCGGGTGG ATGCGCGGGG CGCACTGACC
TGA
 
Protein sequence
MSESPHTMST SSSRLSDLIG KPVTEVDTPA LVIDLDAMKR NLGRMAEFAK KHSIRWRPHA 
KMHKSASLAK LQIKAGAVGV CVQKTAEAEA MVAGGVYDVY ISNEVIAPAK LARVAALTQK
VAPHSGKLAI AVDSTQGVNR LAQAMNEARA SSGVSTIIDV FVEIDVGQGR CGVEPGAAAV
TLALEIRKHP ALHFAGLQAY HGKAQHIRSA QERRDAIAQA AAAVQRTRDL IEAQGITVGL
VTGGGTGSFV LEAASGVYGE LQASSFMFMD VDYAKNERDP AQPQFEHALF VKTQVISTRS
GHAVCDAGHK SHAIDSGLPL VHTLDGEDAL EYFNGGDEHG ILRPAAGGTR LPGLGHILWL
IPGHCDPTVN LHDVMIAVGG GLRRGIVQRI FRVDARGALT