Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4092 |
Symbol | |
ID | 4013225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4300760 |
End bp | 4301962 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637943740 |
Product | putative threonine aldolase |
Protein accession | YP_550883 |
Protein GI | 91789931 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.87338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAAT CCCCGCACAC CATGAGTACA TCGTCGTCCC GTTTGTCCGA CCTGATAGGC AAGCCCGTCA CCGAGGTCGA TACACCCGCC CTCGTCATTG ACCTGGACGC GATGAAGCGC AACCTGGGGC GCATGGCCGA GTTTGCGAAA AAGCACAGCA TTCGCTGGCG TCCCCATGCC AAGATGCACA AGAGTGCGTC ACTCGCCAAA CTGCAGATCA AGGCCGGCGC GGTGGGCGTG TGCGTGCAAA AGACTGCCGA GGCCGAGGCC ATGGTGGCCG GCGGGGTGTA CGACGTCTAC ATCAGCAACG AGGTCATTGC GCCTGCCAAG CTCGCACGGG TGGCGGCACT GACGCAGAAG GTCGCGCCCC ATAGCGGCAA GCTGGCCATT GCGGTGGACA GCACCCAGGG CGTAAACCGG CTGGCGCAGG CCATGAACGA GGCCAGGGCC AGCAGCGGCG TGAGCACGAT CATTGACGTG TTCGTCGAAA TCGACGTCGG ACAGGGCCGC TGTGGTGTGG AGCCTGGAGC CGCCGCGGTG ACGCTGGCGC TGGAGATCCG CAAACACCCG GCCCTGCACT TTGCCGGCCT GCAGGCCTAC CATGGCAAGG CCCAGCATAT TCGCAGCGCG CAGGAGCGGC GCGACGCGAT TGCCCAAGCC GCAGCCGCCG TGCAGCGCAC GCGCGACCTG ATCGAAGCCC AGGGCATCAC AGTCGGCCTG GTCACCGGCG GCGGTACCGG CAGTTTTGTG CTGGAGGCCG CCAGCGGCGT TTACGGCGAA TTGCAGGCGA GCTCCTTCAT GTTCATGGAT GTCGACTACG CGAAAAACGA GCGCGACCCG GCGCAGCCGC AGTTCGAGCA CGCCCTGTTT GTCAAGACAC AGGTCATCAG CACCCGCAGC GGCCATGCCG TGTGCGACGC CGGCCACAAG AGTCACGCCA TCGATTCCGG CCTGCCGCTG GTGCATACCC TGGATGGCGA GGATGCGCTG GAGTACTTCA ACGGCGGTGA TGAGCATGGC ATCTTGCGGC CCGCTGCGGG CGGCACGCGC CTGCCGGGGC TGGGCCACAT CCTGTGGCTG ATTCCCGGCC ATTGCGACCC GACCGTCAAC CTGCACGATG TGATGATTGC GGTGGGCGGT GGCCTGCGCA GGGGCATTGT GCAGCGCATA TTCCGGGTGG ATGCGCGGGG CGCACTGACC TGA
|
Protein sequence | MSESPHTMST SSSRLSDLIG KPVTEVDTPA LVIDLDAMKR NLGRMAEFAK KHSIRWRPHA KMHKSASLAK LQIKAGAVGV CVQKTAEAEA MVAGGVYDVY ISNEVIAPAK LARVAALTQK VAPHSGKLAI AVDSTQGVNR LAQAMNEARA SSGVSTIIDV FVEIDVGQGR CGVEPGAAAV TLALEIRKHP ALHFAGLQAY HGKAQHIRSA QERRDAIAQA AAAVQRTRDL IEAQGITVGL VTGGGTGSFV LEAASGVYGE LQASSFMFMD VDYAKNERDP AQPQFEHALF VKTQVISTRS GHAVCDAGHK SHAIDSGLPL VHTLDGEDAL EYFNGGDEHG ILRPAAGGTR LPGLGHILWL IPGHCDPTVN LHDVMIAVGG GLRRGIVQRI FRVDARGALT
|
| |