| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4087 |
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| Symbol | |
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| ID | 4013259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4297018 |
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| End bp | 4297785 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637943735 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_550878 |
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| Protein GI | 91789926 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA CCCCGTCCCT CCCCGTTGTT CTCGTGACCG GCGCCGCCAG GCGGCTGGGC
CGCGAGATCG CGCTGGCGCT GGCAGCCGGC GGCTGGCAGG TGGCGGTGCA TTACCGCGGC
TCCGAAGAAG ATGCCCTGAA AACGGTCGCT GATTGCACCC GTTTGTCGGG GGCTGCCGCC
GCTTTTCAGT GTGACCTGGA ACAGGAAGCC GGCGTTCGCG CCCTGCTGCC CCGCGTTGCC
GCGCATTTCG GCCGCGTTGA CGCGGTGGTC AACAACGCCT CGACCTTTGA GCAGGACAGC
GCCGCCAGCT TTGGCTTTGC CGCCCTGGAC AAGCACCTGC ACAGCAATAC CGGCGCGGCC
ATCCTGCTGG CCCAGGCGCT GCATGCGCAT GTGAGCAGCC GCAACGCCAG CGGCGCCGTC
GTCAACCTGC TGGACCAGAA GCTGTGGAAC CAGAACCCCG ATTTCTTCAG CTACACCCTG
TCCAAGGCCG CGCTGGAGGC GGCCGGTACC ATGCTGGCGC TGGCGCTGGC GCCGCAGGTG
CGCGTGGTCG GCGTGGCGCC CGGCCTCACC CTGACCAGCC ACCTGCTGAG CGACGAGCAA
TTCGAGGCGC GGCACAAGCT GTCGCCGCTG GGCCGCTCCT CCACGCCGGC CGACGTGGCT
GCCGCGGTGA AGTTCGCGCT GGAGAACAGC TCCATGACAG GCACCACCCT GCTGGTGGAC
GGCGGCCAGC ACCTGATGAA ATTTGAGCGC GACTTCTCGC TGATGTGA
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| Protein sequence | MTATPSLPVV LVTGAARRLG REIALALAAG GWQVAVHYRG SEEDALKTVA DCTRLSGAAA
AFQCDLEQEA GVRALLPRVA AHFGRVDAVV NNASTFEQDS AASFGFAALD KHLHSNTGAA
ILLAQALHAH VSSRNASGAV VNLLDQKLWN QNPDFFSYTL SKAALEAAGT MLALALAPQV
RVVGVAPGLT LTSHLLSDEQ FEARHKLSPL GRSSTPADVA AAVKFALENS SMTGTTLLVD
GGQHLMKFER DFSLM
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