Gene Bpro_4071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4071 
Symbol 
ID4013243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4279583 
End bp4280290 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID637943719 
ProductTetR family transcriptional regulator 
Protein accessionYP_550862 
Protein GI91789910 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.365856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0686473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTGA AGGCAGCCAT CACGGCCAAG ACCGCCAAAC CTCGTTCATC GGCCTCCCGG 
CGCGCGCCGG CCAAGCGGCC CGGCGTGCGC GAGCAGGCGG CGCAAACCAC GCGCGACAAC
ATCCTGCGCG CGGCCACCAA GGTCTTCGCC CGTTACGGCT ACGAGGGTGG CAGCGTGGAG
AAAATCTCCC AATCGGCCAA ATCGTTCGAC CGGATGATTT ACTACTACTT CGGCAGCAAG
GAAGGCTTGT TCATCGAGGT ACTGGAAGAC ATGTACCGTC GGATGAACGA TGCGGAGCTG
GAGCTGACGC TGGACATCGA ACAGCCGGTG GAGTCCCTCA AGGAGATCAT TCGCTTCGTG
GTTTCTTATT ACAACAAGAA TCCTGAATTC ATCACGCTGC TCAATACGGA AAACCTGCAT
CGAGGCAAAC ATATCGCGAA GTCGATGCGC GCCAGGGAAT ATTCGTCTCC GGCCATAGCG
ATCATCAGCC AGCTGCTGGA AAGCGGTGTT CGCAAAGGCG TGTTCCGCGC CGATATTTCC
GCGCGCAATG TCTACTTGCT GATAGCGGCG ACCGGTTATT TCTACGTCTC CAACCGCCAC
ACCCTGTCGG CCTTTCTGGG GGAAGACCTG CAGGCACCCG AGGCCCTGGC CCAATGGCAG
GCCTTCATCA CCAGTACCGT GCTGCGCACT GTCATGCGGA ATCCTTGA
 
Protein sequence
MTVKAAITAK TAKPRSSASR RAPAKRPGVR EQAAQTTRDN ILRAATKVFA RYGYEGGSVE 
KISQSAKSFD RMIYYYFGSK EGLFIEVLED MYRRMNDAEL ELTLDIEQPV ESLKEIIRFV
VSYYNKNPEF ITLLNTENLH RGKHIAKSMR AREYSSPAIA IISQLLESGV RKGVFRADIS
ARNVYLLIAA TGYFYVSNRH TLSAFLGEDL QAPEALAQWQ AFITSTVLRT VMRNP