Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4062 |
Symbol | |
ID | 4013273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4269694 |
End bp | 4270473 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637943710 |
Product | ABC transporter related |
Protein accession | YP_550853 |
Protein GI | 91789901 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.662042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.243406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTTGC TCAAAGTGTC TAGCCTGGGT AAATCGTTCG GCGGTGTCAA GGCGGTCGAT GGCATCAGTT TTGAGCTGGC GGCGGGTGAA CTGCTGGCCC TGATCGGGCC GAACGGTGCC GGCAAGTCAA CGACCTTCAA CATGGTGAAC GGCCAGCTTC GCGCGGATGC CGGTTCCATC CAGCTGGACT CGCAGGAGCT GGTGGGCCTG GCACCCCGCG ACATCTGGCG GCGCGGTGTT AGCCGGACTT TCCAGATCGC AGAGACGTTT TCATCGCTGA CGGTGGTGGA AAACGTCCAG ATGGCCTTGC TGTCGTCGGA CCACAAGCTG TTTTCGATGT GGCGCCGGGC TGCCGACCAC AAACGTGACC AGGCCCTCCT CCTGCTCGAG CAGGTCAATA TGAAAGCCCA GGCCGACCGG CCTTGCAGCG TATTGGCTTA TGGCGACGTC AAGCGCGTGG AGCTCGCCAT GGCCATGGCC AACGATCCGA AGCTGCTGTT GATGGATGAG CCGACGGCAG GCATGGCGTC CAGGGAGCGC AACGATTTGA TGGCTTTGAC CAAGCAATTG GTCATCGATC GCGGCATGGC GGTGCTGTTT ACCGAACACA GCATGGACGT GGTTTTCGCG TATGCCGATC GCATGATCGT GCTGGCGCGG GGCCGGCTGA TTGCGGAAGG AAAACCCCTG AAAATCCGCG ATCACCCCAA AGTCCAGGAA GTTTATTTTG GCAGCGGTAA AACGTTCGAG AAAAAAATTC CGGAAAAGGA AGCGGCGTGA
|
Protein sequence | MSLLKVSSLG KSFGGVKAVD GISFELAAGE LLALIGPNGA GKSTTFNMVN GQLRADAGSI QLDSQELVGL APRDIWRRGV SRTFQIAETF SSLTVVENVQ MALLSSDHKL FSMWRRAADH KRDQALLLLE QVNMKAQADR PCSVLAYGDV KRVELAMAMA NDPKLLLMDE PTAGMASRER NDLMALTKQL VIDRGMAVLF TEHSMDVVFA YADRMIVLAR GRLIAEGKPL KIRDHPKVQE VYFGSGKTFE KKIPEKEAA
|
| |