Gene Bpro_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4062 
Symbol 
ID4013273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4269694 
End bp4270473 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID637943710 
ProductABC transporter related 
Protein accessionYP_550853 
Protein GI91789901 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.662042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.243406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTGC TCAAAGTGTC TAGCCTGGGT AAATCGTTCG GCGGTGTCAA GGCGGTCGAT 
GGCATCAGTT TTGAGCTGGC GGCGGGTGAA CTGCTGGCCC TGATCGGGCC GAACGGTGCC
GGCAAGTCAA CGACCTTCAA CATGGTGAAC GGCCAGCTTC GCGCGGATGC CGGTTCCATC
CAGCTGGACT CGCAGGAGCT GGTGGGCCTG GCACCCCGCG ACATCTGGCG GCGCGGTGTT
AGCCGGACTT TCCAGATCGC AGAGACGTTT TCATCGCTGA CGGTGGTGGA AAACGTCCAG
ATGGCCTTGC TGTCGTCGGA CCACAAGCTG TTTTCGATGT GGCGCCGGGC TGCCGACCAC
AAACGTGACC AGGCCCTCCT CCTGCTCGAG CAGGTCAATA TGAAAGCCCA GGCCGACCGG
CCTTGCAGCG TATTGGCTTA TGGCGACGTC AAGCGCGTGG AGCTCGCCAT GGCCATGGCC
AACGATCCGA AGCTGCTGTT GATGGATGAG CCGACGGCAG GCATGGCGTC CAGGGAGCGC
AACGATTTGA TGGCTTTGAC CAAGCAATTG GTCATCGATC GCGGCATGGC GGTGCTGTTT
ACCGAACACA GCATGGACGT GGTTTTCGCG TATGCCGATC GCATGATCGT GCTGGCGCGG
GGCCGGCTGA TTGCGGAAGG AAAACCCCTG AAAATCCGCG ATCACCCCAA AGTCCAGGAA
GTTTATTTTG GCAGCGGTAA AACGTTCGAG AAAAAAATTC CGGAAAAGGA AGCGGCGTGA
 
Protein sequence
MSLLKVSSLG KSFGGVKAVD GISFELAAGE LLALIGPNGA GKSTTFNMVN GQLRADAGSI 
QLDSQELVGL APRDIWRRGV SRTFQIAETF SSLTVVENVQ MALLSSDHKL FSMWRRAADH
KRDQALLLLE QVNMKAQADR PCSVLAYGDV KRVELAMAMA NDPKLLLMDE PTAGMASRER
NDLMALTKQL VIDRGMAVLF TEHSMDVVFA YADRMIVLAR GRLIAEGKPL KIRDHPKVQE
VYFGSGKTFE KKIPEKEAA