| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4052 |
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| Symbol | |
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| ID | 4013263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4253955 |
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| End bp | 4254575 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637943700 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_550843 |
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| Protein GI | 91789891 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.654471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.207214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCGT TTTTACTGGC GGTGGACCGT TTTTCCACCT GGATCGGCAA GACCTGCGCC
TGGAGCGTGG TGGCGCTGAC GATGCTGATC AGCTGGGAAG TGTTCAACCG CTACGTGCTC
GGCCGGCCGC ATGCGTGGGT GCTCGACGCG CAGATCATGC TGTACGGCCT GCTGTTCATG
ATGGCGGGCG CCTACACGCT GAGCAAGAAT GGCCATGTGC GCGGCGACGT GCTCTATGGC
TTCCTCAAGC CGCGCACCCA GGCCATCATC GACCTGACGC TTTACATCGT CTTTTTCCTG
CCGGGTATCG TCGCCCTGAC CTGGGCCGGC TGGACCTATG CCAACGAGTC GCTGGCGATT
CGCGAGCAGA CCTTTAACGC GGACCCGATC CCGGTTTATC CCTTCAAATT TGTGATCCCT
TTTGCCGGCT TAGCGCTGCT GTTGCAGGGC ATCGTGGAAA TCATCCGCTG CATTCTGTGC
ATCCAGACCG GCGCGTGGCC GGTGCGGGAA GGCGACGTGG AGGAGGTGGA CGTGGAAAAA
CTCAAGGAAA TGGTGCACGT GAAAGACGAC GACATCGCCG CGCTCGATCG GGATCTGGCG
CTCAAGGAGA ACAATAAATG A
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| Protein sequence | MQSFLLAVDR FSTWIGKTCA WSVVALTMLI SWEVFNRYVL GRPHAWVLDA QIMLYGLLFM
MAGAYTLSKN GHVRGDVLYG FLKPRTQAII DLTLYIVFFL PGIVALTWAG WTYANESLAI
REQTFNADPI PVYPFKFVIP FAGLALLLQG IVEIIRCILC IQTGAWPVRE GDVEEVDVEK
LKEMVHVKDD DIAALDRDLA LKENNK
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