| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4039 |
|---|
| Symbol | |
|---|
| ID | 4013289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4239756 |
|---|
| End bp | 4240730 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637943688 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_550831 |
|---|
| Protein GI | 91789879 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.191923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.599715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTCA TTTCCCGCAG AACCCTTGTA ACCGTTGCCG GCCTTGCCGC TGCCTCATGG
CTGAACCCGG TGCGCGCGCA GCTCGCAGGC AAGCCGGTCA CCCTGATCGT TCCCGCGGCG
GCCGGCGGCA CCACGGACAT CGCGGCGCGC ATGCTGGCCG AACCGCTGGG GCGGATTTTG
CAGACCTCGG TCGTCGTGGA CAACCGGGGC GGCGGCAACG GCAACATTGC CGGCCAGACC
GTCGCGCGCG GACCGGCCGA CGGTACCAGC CTGCTGGTGC AGTATTCAGG TTACCAGTGC
ATCACACCGC TGATCCAGCC GGTGGCCGGC TTTGACCCGG CCACCAACCT CAAGCCGCTG
GGCCATCTAA TCGACGCGCC ACAATTGATG GTGGTACGCG CTAATTTCCC GGCCGACAAC
TTCGCGGATT TTCTCAAACA CGTCAAAGCC AATCCCGGCA AGGTCAACTA CGCGTCCAGC
GGCAACGGAT CACTGCAGCA TGTCACGACC GAGCTGCTGA AGGACCTGAC CAAAACCTTC
ATGGTGCACA TCCCTTACCG CGGCACGGGC CCGGCACTGA ACGACCTGCT GGCCGGCACG
GTGGACTGCA CCATCACCAC GCCGCCGCCA CTGCTGCCAC ACATCCGTGC CGGCAAGCTG
AAAGCGCTGA TGGTGACCGG TCGCACGCGA CTGGCCGCAC TGCCCAATGT GCAGACCGCG
ACCGAAATGA GAGTGCCGCT GGTGGCGTCT TCCTGGTTTG CGGTCTACGG CCCGACGGGT
CTGTCTGCGG ACCTTCAGAA TCGCCTCTCC CTGGCCATCC GGCAGGTGGT CGAATCGGAC
AACTTCAGGA AACGCGCCGA GGAACAGGGC GCAAAGGCGA TCGCCATGAA TGGCGCGGAA
CTGGATGCGC TGGGTAGCAA CGAACGCAAG ATGTGGGGAC GCATCGTCAA AGTGGCCAAT
ATCAAGGCTG ACTAG
|
|---|
| Protein sequence | MTFISRRTLV TVAGLAAASW LNPVRAQLAG KPVTLIVPAA AGGTTDIAAR MLAEPLGRIL
QTSVVVDNRG GGNGNIAGQT VARGPADGTS LLVQYSGYQC ITPLIQPVAG FDPATNLKPL
GHLIDAPQLM VVRANFPADN FADFLKHVKA NPGKVNYASS GNGSLQHVTT ELLKDLTKTF
MVHIPYRGTG PALNDLLAGT VDCTITTPPP LLPHIRAGKL KALMVTGRTR LAALPNVQTA
TEMRVPLVAS SWFAVYGPTG LSADLQNRLS LAIRQVVESD NFRKRAEEQG AKAIAMNGAE
LDALGSNERK MWGRIVKVAN IKAD
|
|---|
| |