| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4023 |
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| Symbol | |
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| ID | 4013312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4221391 |
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| End bp | 4223406 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637943672 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_550815 |
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| Protein GI | 91789863 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.367232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.629555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTATT TCGTCACGGG AGCCACCGGC TTCATTGGTA AACGGCTGGT TAAAAAACTC
CTGGAGCGAA AAGGCAGCAC CGTTCATTTC CTGATCCGCC AGGAAAGCGC CGGCAAATTG
GCGGCGCTCA GGGCGTACTG GGGCGTGAGT GCCGGCAGGG CGGTTGCCGT GCATGGTGAC
CTGACCCGCA AAAAGCTCGG TGTCAGCAGC GAGGACATCA AAAAACTCAA GGGGCAGGTG
AGCCATTTTT ATCACCTGGC AGCGGTGTAC GACCTGGGCG CCGACGAGGA AAGCCAGATC
GCCGTCAACA TTGACGGCAC ACGCAACACC GTCGAGTTTG CCAAGGCGAT TGATGCAGGC
CACTTTCATC ACGTGAGCTC CATCGCCGCG GCAGGCCTGT ATGAAGGCGT GTTCCGCGAA
GACATGTTCG AGGAGGCTGA GAACTACGAA CACCCGTATT TCATGACCAA GCACGAGAGC
GAAAAAATCG TGCGCGCCGA GTGCAAGGTG CCGTGGACGG TGTTTCGGCC GGCCATGGTG
GTGGGCGACA GCACCACCGG CGAAATGGAC AAGATTGACG GCCCTTACTA CTTCTTCAAG
CTGATCCAGC GCATGCGGCA ACTGCTGCCG CCCTGGATGC CGGCCGTGGG GCTGGAAGGC
GGGCGCATCA ACATTGTTCC GGTCGACTTC GTGGTCGATG CGCTGGACCA CATCAGCCAC
CTCCCCAAAG ACAGGGGCGA CATTGCCAAA AAATGCTTCC ATCTGGTGGA CCCGGTGGGT
TACCGCGTCG GCGATGTGCT CGACATCTTC AGCCGGGCGG CCCACGCACC GAAGATGAAC
CTGTTTGTCA ATGCGGCCCT GCTGGGCTTC ATTCCGCGCG GCGTCAAGAA AAGCCTGATG
GCGCTTGCGC CGGTGCGCCG CGTGCGCGCC GCCGTCATGG CCGACCTCGG CCTGCCAGAG
GACATGCTGA CCTTCGTGAA CTACCCCACC CGGTTTGATT GCCGGGGCGC GGCCACTGCG
CTCAAGGGAT CCGGCATTGA ATGCCCCAAC CTCAAGGACT ACGCATGGCG CCTGTGGGAT
TACTGGGAGC GCCACCTCGA CCCCGACCTG CACATTGACC GCACGCTCAA GGGCACGGTC
GGCGGCAAGG TGGTGCTGAT TACCGGCGGC TCTTCAGGCA TTGGCCTGGC GGCAGCGCAC
AAATTTGCCG AGGCCGGCGC CATCACCGTC ATCTGCGGCC GCGACCAGGA CAAGCTCGAC
GAGGCCTGCA AAGAGGCGAA AGCCAAAGGC TACAACTTTG TTGCTTACCC GGCCGATATC
GCCGACATGG CAGACTGCGA CCGCTTCCTC AAGGAACTGA TCGCCAACCA CGGCGGCGTC
GACTTCCTGA TCAACAACGC CGGACGCTCG ATTCGCCGCG CCATTGAGGC CAGTTACGAC
CGTTTCCATG ATTTCGAGCG CACCATGCAG CTCAATTACT TTGGCTGCCT GCGCGTGACC
ATGGGCCTGC TGCCCGGCAT GGCGGCCAGG CGCAAGGGCC ACGTGGTCAA CATCAGCTCC
ATCGGCGTGC TGACCAATGC GCCACGCTTT TCGGCCTACG TGGCCTCCAA GGCCGCGCTG
GACGCCTGGA CGCGCTGTGC CTCCAGCGAG TATGCCGACC TCGGCATCGG CTTTACCACC
ATCAGCATGC CGCTGGTGCG CACGCCCATG ATTGCGCCCA CCAACCTCTA CAACAACGTA
CCCACCCTTT CGCCCGAAGA GGCCGCCGAC ATGATTGCAC AGGCCTGCAT CTTCAAGCCG
GTGCGCATTG CCACCCGCCT GGGCATTGCC GGCCAGGTGC TGCATGCCCT GGTGCCGCGC
ATCGCCCAGA TTGCCATGAA CACCAGCTTC CGCATGTTTC CTGACTCATC GGCCGCCAAA
GGTGAGAAGG GCGGGAAGGG TGAAAAGAGC GCCAGGCCGC AGCTGTCGGC CGAGGCGGTG
GCCATGCAGC AGATGATGCA GGGGATTCAT TTCTAA
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| Protein sequence | MHYFVTGATG FIGKRLVKKL LERKGSTVHF LIRQESAGKL AALRAYWGVS AGRAVAVHGD
LTRKKLGVSS EDIKKLKGQV SHFYHLAAVY DLGADEESQI AVNIDGTRNT VEFAKAIDAG
HFHHVSSIAA AGLYEGVFRE DMFEEAENYE HPYFMTKHES EKIVRAECKV PWTVFRPAMV
VGDSTTGEMD KIDGPYYFFK LIQRMRQLLP PWMPAVGLEG GRINIVPVDF VVDALDHISH
LPKDRGDIAK KCFHLVDPVG YRVGDVLDIF SRAAHAPKMN LFVNAALLGF IPRGVKKSLM
ALAPVRRVRA AVMADLGLPE DMLTFVNYPT RFDCRGAATA LKGSGIECPN LKDYAWRLWD
YWERHLDPDL HIDRTLKGTV GGKVVLITGG SSGIGLAAAH KFAEAGAITV ICGRDQDKLD
EACKEAKAKG YNFVAYPADI ADMADCDRFL KELIANHGGV DFLINNAGRS IRRAIEASYD
RFHDFERTMQ LNYFGCLRVT MGLLPGMAAR RKGHVVNISS IGVLTNAPRF SAYVASKAAL
DAWTRCASSE YADLGIGFTT ISMPLVRTPM IAPTNLYNNV PTLSPEEAAD MIAQACIFKP
VRIATRLGIA GQVLHALVPR IAQIAMNTSF RMFPDSSAAK GEKGGKGEKS ARPQLSAEAV
AMQQMMQGIH F
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