| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4006 |
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| Symbol | |
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| ID | 4013334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4204005 |
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| End bp | 4204904 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637943655 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_550798 |
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| Protein GI | 91789846 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.670421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTC TTCTTACCGG CGCTACAGGC TTTCTCGGTA CTCATCTTTT AGCTGATTTT
CTAAACCGCA ATTACAAAGT TCTCATGACT AAACGGGCAA GCACAGACTT GGGCCCACTT
TTTCTGCGTT TTGGTAACTT GGAAGCGTGG GATACCGAGG AGTTGGAAAA CATCTTCACT
ACGCACCCTG ATGTTGAGGC GATAGTTCAT GCTGCCACGG ATTATGGCCG TGACAACTCA
AGCCCGACAG CAGTCTTTTG GGCTAATGAA GCGTTCCCGA TAAAATTGAT TGAACTTGCA
ATCCGGCATA ACATCGCGCT ATTTATCAAC ATGGATACCT TCTTTAACTC CGATAAAGTG
TCGTACGACT ATCTCGGAGC CTACACATTA TCCAAACGCC ACTTTCAAGA ATGGGGGCAA
CATTGCGCCA ACACAGGGCG AATCGGTTTT GCCAATCTGC GGCTATTTCA TCTATATGGC
CCGGGAGATG GTCGCCAAAA ATTCGTTCCG GCCATGGTGG GACGTTGCCT GGCTGGTGAG
GAAATTGACC TTACGGACGG TAAGCAGAAG CGCGACTTCA TCCATATTGA TGATGCTGTT
GCAGCTGTGA GTACTGTTTT GGAGGCGGAG GCAGGACGAG GGGGAGGCTA TCGGCATTAC
GATGTGGGAA CCGGCACCTC TCTGCGCATT CGGGACTTCA TTGAAACGGT GAAAAGGCTT
TGCTGCAGCA GCGCGAAGTT AAATTTTGGT GCGTTACCAA ACAGGAAAGG TGAGTTTCAG
AATGCCTGCG CCGAAACTGA AGCGTTGCGT ACCCTTGGGT GGATACCGCG GGTTGGCATC
GAAGCGGGAA TACGGACAGT GATCGAGGAT ATCGGTCAAC GGGCAATAAA AACTACATAG
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| Protein sequence | MKVLLTGATG FLGTHLLADF LNRNYKVLMT KRASTDLGPL FLRFGNLEAW DTEELENIFT
THPDVEAIVH AATDYGRDNS SPTAVFWANE AFPIKLIELA IRHNIALFIN MDTFFNSDKV
SYDYLGAYTL SKRHFQEWGQ HCANTGRIGF ANLRLFHLYG PGDGRQKFVP AMVGRCLAGE
EIDLTDGKQK RDFIHIDDAV AAVSTVLEAE AGRGGGYRHY DVGTGTSLRI RDFIETVKRL
CCSSAKLNFG ALPNRKGEFQ NACAETEALR TLGWIPRVGI EAGIRTVIED IGQRAIKTT
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