| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4003 |
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| Symbol | |
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| ID | 4013331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4201215 |
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| End bp | 4202588 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637943652 |
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| Product | ABC transporter related |
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| Protein accession | YP_550795 |
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| Protein GI | 91789843 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.584674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.718876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTG ACGATATTGC CATCACCGTT CAAGGCGTGT CCAAGCGCTA TGAGCTTTAC
CACAAACCCA GTGACCAGCT TAAGCAGTTC CTGCTGCCGC GGCTTCAGCG TCTCACAGGG
CAACCCCAGC ACCATTACTT TCAGGAGTTT TGGGCACTGA AGGATGTTTC ATTCGATATA
AGAAGAGGTG AGGCCTTTGG CATCGTGGGC CGCAACGGTA GCGGTAAAAG CACGTTGCTC
CAGATCATTA CTGGGACTCT TTCGCCAACA ACCGGAACCG TTTCCACGAG GGGGCGGGTG
GCAGCCTTGC TTGAGTTGGG CTCTGGCTTC GACCCTGAAT TCACCGGGCG TGAAAATATC
TACATGAACG GGGCGCTACT GGGTTTTGAT CGCCAGCAAA TCGACCAGAA ATTTGATGCC
ATCGCCGCGT TCGCCGACAT AGGCTTGCAC CTGGATCAGC CCATTAAGTC CTACTCAAGC
GGAATGGTGG TCCGCCTTGC CATTGCCGTG CAGACTCAGG TCGAGCCCGA CATACTTATT
GTTGATGAAG CACTCGCTGT CGGCGATGCC CTATTTCAAA AACGCTGCTA TCGACAGATC
GACAAATTGC TGGATAACGG GTGCACCCTG CTTTTTGTGT CTCATGATCA GGAAATAGTA
CGGACGCTCA CGAGCAGGGC AGTCTTTTTG AATGCGGGAC TCCCGGTCAA ATATGGCGCC
ACAACCGACG TTTTATTTGC GTACCGGGAA TTTCTTCAGC AACAGGAAGA GGCCGCCTTC
CTTGATCTCC AGGAAAGGTC CAAACAAGAG CTCTTGCCCC AACCCACCAA GAAATCTTAT
GGCAGGCGTG ATGTTGAGAT ACTGGGTGTT GAAGTTCTTG CATCCGATAA AACTCGACAA
AGTGTGTTTT ATGCGGGTGA CACCATAACG ATTGCTATCG AATGCGTTTG CAATACAGAT
ATTGAAAACC TCAATATTGC CTTTCGCATA CTGAACAAGG AAGGCGTCAA GGTCACCACA
TGGGGGACAT TGAATGAAGA CATGCCCAAC TTCCCCACCC ATCTTCAAAG TACTTTTTGG
AATAAGCACT TTTTCAAGGG CGACACATTT AAAGTGAACT TTACCGGCAG TTGCAATCTC
AGCGCAAATC TGTACGAGAT ACAAGCGACC GTGACACGAG AGCACGACCA GTACTACGGC
AATCAACAAG TGCTTCACTG GCTGGACGAA GCGAGCCACT TTACTGTGAT CCTGAAAAAC
AAAGAATATG TTTTCGACGG AATTTGTGAT TTAGGTTTAA GGTCAAGCGT GGAACTGGGA
AGTAGCACTT CAACGGTTGA GCCACATCAA CCCATAACGC CTTCTGCCTC CTGA
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| Protein sequence | MSSDDIAITV QGVSKRYELY HKPSDQLKQF LLPRLQRLTG QPQHHYFQEF WALKDVSFDI
RRGEAFGIVG RNGSGKSTLL QIITGTLSPT TGTVSTRGRV AALLELGSGF DPEFTGRENI
YMNGALLGFD RQQIDQKFDA IAAFADIGLH LDQPIKSYSS GMVVRLAIAV QTQVEPDILI
VDEALAVGDA LFQKRCYRQI DKLLDNGCTL LFVSHDQEIV RTLTSRAVFL NAGLPVKYGA
TTDVLFAYRE FLQQQEEAAF LDLQERSKQE LLPQPTKKSY GRRDVEILGV EVLASDKTRQ
SVFYAGDTIT IAIECVCNTD IENLNIAFRI LNKEGVKVTT WGTLNEDMPN FPTHLQSTFW
NKHFFKGDTF KVNFTGSCNL SANLYEIQAT VTREHDQYYG NQQVLHWLDE ASHFTVILKN
KEYVFDGICD LGLRSSVELG SSTSTVEPHQ PITPSAS
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