Gene Bpro_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3997 
Symbol 
ID4013325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4192850 
End bp4194130 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content61% 
IMG OID637943646 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_550789 
Protein GI91789837 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGTA CTTCTCTTGC CCGCACTGTC GCCATCATCG GCCTGGGCTA CGTAGGCCTG 
CCCCTGGCCG TTGAGTTTGG TAAAAAACGC AAGGTTGTGG GCTTTGACAT CAGCGCTGCT
CGGGTGGCCG AACTTCAGGC AGGGCAAGAC CACACGCTGG AGGTGGAGCC CGAGCAAATG
CGCAAGGCCG TGCACCTGCA GTACACCACC GACCCCGCCG CCCTGCAAGG CTGTGACCTG
TTCATCGTCA CCGTGCCCAC CCCCATCGAC GAATACAAAC GCCCCGATCT GACGCCCCTC
ATCAAGGCCA GTACCACCAT AGGCAAGGTG CTGAAGAAGG GCGACATCGT CATTTACGAA
TCTACCGTCT ACCCCGGCGC TACCGAGGAG GACTGCGTGC CCGTGCTGGA GCAGTACTCG
GGGCTGAAAT TCAATGTCGA TTTTTTTGCA GGCTATTCGC CGGAGCGCGT GAACCCGGGT
GACAAGACCC ATCGCGTTAC CACCATCAAA AAAGTCACGT CCGGCTCCAC CCCCGAGGTG
GCCGACCTGG TGGATGCGCT CTACAACGAA ATCGTGACTG TTGGCACCCA CAAGGCCCCC
AGCATCAGGG TGGCCGAGGC GGCCAAGGTG ATTGAGAACA CCCAGCGTGA TGTCAACATC
GCGCTCATTA ATGAACTGGC GCTTATTTTC AACAGGCTCG GCATAGACAC CGAAGCCGTG
CTGCAGGCGG CAGGCACCAA GTGGAACTTT TTGCCATTCC GCCCCGGCCT GGTGGGCGGG
CACTGCATTG GCGTGGACCC GTACTACCTC ACGCACAAGG CCGAGGCCAT TGGCTATCAC
CCCGAAATCA TCCTCGCCGG CCGCCGCCTG AACGACAGCA TGGGCGCCTA CGTGGTCACC
CAGCTCGTCA AGGCCATGAC AAAGCGCCGC ATCCACGTGC GGGGCGCCCG CGTGCTGGTG
ATGGGCCTGG CCTTCAAGGA AAACTGCCCA GACCTGCGCA ACACCCGCGT GGTAGACATC
GTGCGGGAGC TCACCGACTA CGACGTGCAA GCCGATGTGC ACGACCCCTG GGTTTCGGTC
GAAGAGGCGC AGCTCGAATA CGGCATCACC CCGGTGCGGC AGCCTGAAGG CGGAACTTAC
GACGCCATCA TCGTCGCCGT GGCGCACGAG CAGTTCAAGG CCATGGGCGC CGCTGCCTTT
CGTGCCTTGG GTAAGCCCGA GCACGTGTTG TTTGACCTGA AGTACGTGCT GACGGCGTCT
GAGAGCGACC TGCGGTTATG A
 
Protein sequence
MQSTSLARTV AIIGLGYVGL PLAVEFGKKR KVVGFDISAA RVAELQAGQD HTLEVEPEQM 
RKAVHLQYTT DPAALQGCDL FIVTVPTPID EYKRPDLTPL IKASTTIGKV LKKGDIVIYE
STVYPGATEE DCVPVLEQYS GLKFNVDFFA GYSPERVNPG DKTHRVTTIK KVTSGSTPEV
ADLVDALYNE IVTVGTHKAP SIRVAEAAKV IENTQRDVNI ALINELALIF NRLGIDTEAV
LQAAGTKWNF LPFRPGLVGG HCIGVDPYYL THKAEAIGYH PEIILAGRRL NDSMGAYVVT
QLVKAMTKRR IHVRGARVLV MGLAFKENCP DLRNTRVVDI VRELTDYDVQ ADVHDPWVSV
EEAQLEYGIT PVRQPEGGTY DAIIVAVAHE QFKAMGAAAF RALGKPEHVL FDLKYVLTAS
ESDLRL