| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3983 |
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| Symbol | |
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| ID | 4013350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4176579 |
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| End bp | 4178510 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637943632 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_550775 |
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| Protein GI | 91789823 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAA TAATCCTGGC GTGGCCGCGC GCCGTCAAGC GGCTGGTGGT GGCCGGGCTG
GATGTGGTGA TGGCGGTGGC TGCCACCTGG CTGGCATTTT CCCTGCGCCT GGATGAACCT
CACATTCCTC AGCGTGCTGA AGAATGGTGG GTGTATGCGC TGTGCCCCCT GCTGGCGCTG
CCCGTCTTCA TCAAGTTTGG GCTCTACCGC GCCATTTTCA GGTACACCGG CCGGGCCGCA
CTGGTGGCAA CCACGCAGGC GATTGCCGTC TATGGCGTGT TGTTGCTGGC CGCCCTGATG
TGGCTGCAGT GGCCCAATGT GCCGCGCAGC CTGGGTATTT TGCAGCCCCT GATCTTTTTG
TTATTGGTCG GCTCCAGCCG GGCCATGGCC CGGTTCTGGC TGGCGGGCCT GGGCCACCCA
CATCGAACAG CCGAAGGGCG CTTGCTGATA TTTGGTGCCG GTACGGCAGG CGTGCAGACG
GCCTCGGCGA TCGAGGACTC GGGGCAGTAT GTGCTGTTGG GTTTTGTGGA CGATGACCCG
GGAAAAGTGG GGCGCGATAT CAACGGCGTG CCTGTTTTTT CGCCGGCGCA GGTCTCGGGC
CTGGTGCTGT ACCAGGGGGT GACCGACATC CTGCTGGCCC TGCCCAGTGC CTCCCGGGAG
CGCCGCAATG CGATTATTGA CAGCTTGAGC GAGTTACCGG TTCACGTCCG GTCGCTGCCG
GGTCTGGCCG ATCTGGCCAG TGGCCGTGTC ACCGTGCGTG ATTTCCGTGA GCTGGATGTG
GAGGACCTGC TGGGCCGGGA CCCGGTGCCC CCTGATGCCG AATTGCTGGC GCGCGACCTG
ACGGGCAAGG TGGTGCTGGT CACCGGTGCG GGCGGCAGCA TCGGCAGCGA GCTGTGCCGG
CAAATTGCGC TGCAGCAACC CCGCCAGCTG CTGCTGCTGG ACCACAACGA GTTTGGCTTG
TACAGCATCC ACCAGGAACT GCTGGCCCTG TGTTCGGTGC AGGGCCTCAG GATCGAGCTG
GTGCCCCTGC TGGGCAGTGT CGCCAATTAC CCGCGCATGG CGGCGCTCTG CCAGCGCTAC
CGGCCGGTCA CGGTTTACCA CGCGGCGGCC TACAAGCATG TGCCGCTCGT GGAAAGCAAC
GCCAGCGAAG GTATTGCAAA CAATGTGTTC GGCACCTTCA ACATGGCCCG GGCGGCGATA
GAGCAAGGCG CCAGCCGCTT TGTGCTGGTG TCTACCGACA AGGCCGTCAG GCCGACCAAT
GTGATGGGGG CCAGCAAACG CATGGCTGAG CTGGTGCTGC AGGCGCTGGC CGCCGAGACG
GCACCAATGC TTTGTGGCGG TGGTGGCAGC ACTGAAGCGC CACCACGCGG AGTGGTCAAC
CAGACCTGTT TCACCATGGT GCGTTTCGGC AACGTGCTGG ACTCAAGCGG TAGCGTGGTC
CCGCTGTTTC GCCGGCAGAT CGCGGAAGGC GGGCCGCTGA CGGTCACGCA TGCCGAGGTC
ACCCGCTACT TCATGACCAT TCCGGAAGCC GCCCAGCTGG TGCTGCAGGC CGGTGCCATG
GCCAGCGGCG GTGACGTGTT CGTGCTCGAC ATGGGCGCGC CGGTCAAGAT ACTGGATCTG
GCGCGCCGCA TGGTTGAGCT GTCGGGCCTG ACAGTGCGCG ACGCCGAATC GCCGGACGGT
GACATCGACA TTGAAGTCAC CGGCTTGCGC CCTGGCGAAA AGCTGTACGA GGAATTGCTG
ATTGGGAACA ACCCGCAAGC AACCGCGCAT CCCCGCATCA TGAAGGCGCA TGAATCCCTG
GCGCCGTGGC CGCAGCTGTC GGCCGAATTG AGGGCGCTGG GCGTGGCGGT GCAGCAGGAT
GACCTGGCCG CCATCAACGG CCTGCTGGCA CGGCATGTGC AGGGTTACAG CCCCAAACCG
GGCGCGTCCT GA
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| Protein sequence | MQQIILAWPR AVKRLVVAGL DVVMAVAATW LAFSLRLDEP HIPQRAEEWW VYALCPLLAL
PVFIKFGLYR AIFRYTGRAA LVATTQAIAV YGVLLLAALM WLQWPNVPRS LGILQPLIFL
LLVGSSRAMA RFWLAGLGHP HRTAEGRLLI FGAGTAGVQT ASAIEDSGQY VLLGFVDDDP
GKVGRDINGV PVFSPAQVSG LVLYQGVTDI LLALPSASRE RRNAIIDSLS ELPVHVRSLP
GLADLASGRV TVRDFRELDV EDLLGRDPVP PDAELLARDL TGKVVLVTGA GGSIGSELCR
QIALQQPRQL LLLDHNEFGL YSIHQELLAL CSVQGLRIEL VPLLGSVANY PRMAALCQRY
RPVTVYHAAA YKHVPLVESN ASEGIANNVF GTFNMARAAI EQGASRFVLV STDKAVRPTN
VMGASKRMAE LVLQALAAET APMLCGGGGS TEAPPRGVVN QTCFTMVRFG NVLDSSGSVV
PLFRRQIAEG GPLTVTHAEV TRYFMTIPEA AQLVLQAGAM ASGGDVFVLD MGAPVKILDL
ARRMVELSGL TVRDAESPDG DIDIEVTGLR PGEKLYEELL IGNNPQATAH PRIMKAHESL
APWPQLSAEL RALGVAVQQD DLAAINGLLA RHVQGYSPKP GAS
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