Gene Bpro_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3980 
Symbol 
ID4013347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4173061 
End bp4174689 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content66% 
IMG OID637943629 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_550772 
Protein GI91789820 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.993418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCC CCGGCCGTGC CTGGTTTGCC CGGTTAAGCG ACCTGGTACG CCACCTGAGT 
AGTGGTCTGA ATACTGGCCT GAAGAGCCGC CTTCACGCCA GCGCTTTCCA TGTCGTCAAC
AGCCGGCTGA TGCCCGCCGC CATGAAGTCG GGCCTGCAGC GCAGGTTGCT GCTGCTGCTG
CTCGTTCCGC TTGGTATTTT TGCACTGGTG AGTATTTACT TTGACTACCA GACCGCTGGC
AACGTGGCCT TGCAAAAAGA CGAGCAACTG CTGCGGCTGA TTCCCCTGCT GACCGATTCG
GTAGTGGCGC CCGGTGCCAC GCCGGACAGC GCGCCGGTGC TGCTGCTCGC CCCCGCACTG
GAGGACTTCA TCAAGGGTCT TGCCGGCTCC GCGGGCTTTC GCATTTCCGA TGCCAAGGGC
GGGTTTCTGG CGGGCGACCC CTGGATCGCC GACATCCTGC CGGCGACCCG TGAGCCGGAG
TTTCACAGCA TGGAGGACGG CGGCGTGACT TACCGCATTG CGGTGCAGCG CGTGAACACC
GTGGCCGGCG AGCTGATCGT GCAGCTGGCC GACGGCTCGG ACCCGCGCCA GCAGTGGGTG
CGCTCCATCC TGCTCAAGGT GCTGTTGCCC AATTTCATTC TGGTGGTGGC GGCGGGGTTT
GCCGTCAACT GGGCCGTCAC GCGCGCGCTC AAGCCGCTGA TTGATTTGAA GGAAGCCGTG
GAGCGCCGCA GCCCGCGGGA CCTGAGCGCC ATCGACCCGC TCACCACGCC GGCCGAGGTG
CAGCCGCTGG TGAGCGCCCT GAATCGCCTG TTTGGCCTCG TCAATGACCA GGCCGACGGA
CAGCGTCGCT TTGTCGCCGA CGCTGCGCAC CAGTTGCGTA CTCCGCTGGC CGGGCTGCAG
GCCCAAGTCG AGGCGTGGGC GCAGGCCGCG CGGGCCAAAG GGGCGGACGG CGCCATCCTG
CTGTCTGCCG ACAAGATCAT CAAGCTGCGC AGCGCCACGA GGCGTACCTC GCAACTGGCC
AACCAGTTGC TGGCACTGTC GCGCGCTGAC GCGTCGGCCA TGGGCGCCCA GCCCACGCAG
CGGGTGGACC TCAAGGACCT GTGCGAATCG ATTTTGCCCC TGCATCTGGA TGCCGCTACT
GGCAAAGGCA TAGACCTGGG GCTGGACGCC CGCTCTGCGC AAGTGAACGG CTACGAGTGG
CTGCTGCGGG AACTGCTGGG CAATCTGGTG GACAACGCCG TCAAATACAC CCCGCCCGGC
GGCACGGTGA CGATTCGCTG CGGCCTTCTT CCCGCTTCGG GTGATCAGGC CCCTGACACG
CACCCGCCGC GCGCGGCTGA AGGTGAGGGT GAGGCCAACG GCGTGCATCG GCGCTGGGGC
GTTTTTCTGG AAGTGGAAGA CGACGGGCCC GGCATTGCCC CCGAGGAGCG CGCCAAGGCC
TTGCAGCGCT TTTACCGCGT GCGGGGCACG GTCGGTGAGG GCAACGGCCT GGGACTGGCG
ATTGCCGATG AGATCGCCCG TGTGCACCAT TCGCAGCTGG AGCTGGACTA TGCCTGCCAA
GGCACTGGTG GAGATGCAGG TGATGCGGCG CAAGGCCCGC GCGGTTTGCG GGTGCGCCTG
CGTCTGTAG
 
Protein sequence
MSSPGRAWFA RLSDLVRHLS SGLNTGLKSR LHASAFHVVN SRLMPAAMKS GLQRRLLLLL 
LVPLGIFALV SIYFDYQTAG NVALQKDEQL LRLIPLLTDS VVAPGATPDS APVLLLAPAL
EDFIKGLAGS AGFRISDAKG GFLAGDPWIA DILPATREPE FHSMEDGGVT YRIAVQRVNT
VAGELIVQLA DGSDPRQQWV RSILLKVLLP NFILVVAAGF AVNWAVTRAL KPLIDLKEAV
ERRSPRDLSA IDPLTTPAEV QPLVSALNRL FGLVNDQADG QRRFVADAAH QLRTPLAGLQ
AQVEAWAQAA RAKGADGAIL LSADKIIKLR SATRRTSQLA NQLLALSRAD ASAMGAQPTQ
RVDLKDLCES ILPLHLDAAT GKGIDLGLDA RSAQVNGYEW LLRELLGNLV DNAVKYTPPG
GTVTIRCGLL PASGDQAPDT HPPRAAEGEG EANGVHRRWG VFLEVEDDGP GIAPEERAKA
LQRFYRVRGT VGEGNGLGLA IADEIARVHH SQLELDYACQ GTGGDAGDAA QGPRGLRVRL
RL