Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3980 |
Symbol | |
ID | 4013347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4173061 |
End bp | 4174689 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637943629 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_550772 |
Protein GI | 91789820 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.993418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCCC CCGGCCGTGC CTGGTTTGCC CGGTTAAGCG ACCTGGTACG CCACCTGAGT AGTGGTCTGA ATACTGGCCT GAAGAGCCGC CTTCACGCCA GCGCTTTCCA TGTCGTCAAC AGCCGGCTGA TGCCCGCCGC CATGAAGTCG GGCCTGCAGC GCAGGTTGCT GCTGCTGCTG CTCGTTCCGC TTGGTATTTT TGCACTGGTG AGTATTTACT TTGACTACCA GACCGCTGGC AACGTGGCCT TGCAAAAAGA CGAGCAACTG CTGCGGCTGA TTCCCCTGCT GACCGATTCG GTAGTGGCGC CCGGTGCCAC GCCGGACAGC GCGCCGGTGC TGCTGCTCGC CCCCGCACTG GAGGACTTCA TCAAGGGTCT TGCCGGCTCC GCGGGCTTTC GCATTTCCGA TGCCAAGGGC GGGTTTCTGG CGGGCGACCC CTGGATCGCC GACATCCTGC CGGCGACCCG TGAGCCGGAG TTTCACAGCA TGGAGGACGG CGGCGTGACT TACCGCATTG CGGTGCAGCG CGTGAACACC GTGGCCGGCG AGCTGATCGT GCAGCTGGCC GACGGCTCGG ACCCGCGCCA GCAGTGGGTG CGCTCCATCC TGCTCAAGGT GCTGTTGCCC AATTTCATTC TGGTGGTGGC GGCGGGGTTT GCCGTCAACT GGGCCGTCAC GCGCGCGCTC AAGCCGCTGA TTGATTTGAA GGAAGCCGTG GAGCGCCGCA GCCCGCGGGA CCTGAGCGCC ATCGACCCGC TCACCACGCC GGCCGAGGTG CAGCCGCTGG TGAGCGCCCT GAATCGCCTG TTTGGCCTCG TCAATGACCA GGCCGACGGA CAGCGTCGCT TTGTCGCCGA CGCTGCGCAC CAGTTGCGTA CTCCGCTGGC CGGGCTGCAG GCCCAAGTCG AGGCGTGGGC GCAGGCCGCG CGGGCCAAAG GGGCGGACGG CGCCATCCTG CTGTCTGCCG ACAAGATCAT CAAGCTGCGC AGCGCCACGA GGCGTACCTC GCAACTGGCC AACCAGTTGC TGGCACTGTC GCGCGCTGAC GCGTCGGCCA TGGGCGCCCA GCCCACGCAG CGGGTGGACC TCAAGGACCT GTGCGAATCG ATTTTGCCCC TGCATCTGGA TGCCGCTACT GGCAAAGGCA TAGACCTGGG GCTGGACGCC CGCTCTGCGC AAGTGAACGG CTACGAGTGG CTGCTGCGGG AACTGCTGGG CAATCTGGTG GACAACGCCG TCAAATACAC CCCGCCCGGC GGCACGGTGA CGATTCGCTG CGGCCTTCTT CCCGCTTCGG GTGATCAGGC CCCTGACACG CACCCGCCGC GCGCGGCTGA AGGTGAGGGT GAGGCCAACG GCGTGCATCG GCGCTGGGGC GTTTTTCTGG AAGTGGAAGA CGACGGGCCC GGCATTGCCC CCGAGGAGCG CGCCAAGGCC TTGCAGCGCT TTTACCGCGT GCGGGGCACG GTCGGTGAGG GCAACGGCCT GGGACTGGCG ATTGCCGATG AGATCGCCCG TGTGCACCAT TCGCAGCTGG AGCTGGACTA TGCCTGCCAA GGCACTGGTG GAGATGCAGG TGATGCGGCG CAAGGCCCGC GCGGTTTGCG GGTGCGCCTG CGTCTGTAG
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Protein sequence | MSSPGRAWFA RLSDLVRHLS SGLNTGLKSR LHASAFHVVN SRLMPAAMKS GLQRRLLLLL LVPLGIFALV SIYFDYQTAG NVALQKDEQL LRLIPLLTDS VVAPGATPDS APVLLLAPAL EDFIKGLAGS AGFRISDAKG GFLAGDPWIA DILPATREPE FHSMEDGGVT YRIAVQRVNT VAGELIVQLA DGSDPRQQWV RSILLKVLLP NFILVVAAGF AVNWAVTRAL KPLIDLKEAV ERRSPRDLSA IDPLTTPAEV QPLVSALNRL FGLVNDQADG QRRFVADAAH QLRTPLAGLQ AQVEAWAQAA RAKGADGAIL LSADKIIKLR SATRRTSQLA NQLLALSRAD ASAMGAQPTQ RVDLKDLCES ILPLHLDAAT GKGIDLGLDA RSAQVNGYEW LLRELLGNLV DNAVKYTPPG GTVTIRCGLL PASGDQAPDT HPPRAAEGEG EANGVHRRWG VFLEVEDDGP GIAPEERAKA LQRFYRVRGT VGEGNGLGLA IADEIARVHH SQLELDYACQ GTGGDAGDAA QGPRGLRVRL RL
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