Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3977 |
Symbol | |
ID | 4013344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4170006 |
End bp | 4170743 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637943626 |
Product | GntR family transcriptional regulator |
Protein accession | YP_550769 |
Protein GI | 91789817 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.355862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCC AACTCATTCC CGCTGCCGCT GCAAAACCTT CCACTGAAGA GACCGACGTC GAGCGGCCCT ACCTGCGGCT GGCCGCGCAG ATTCTGGCGC TGCTGGCGCA CAAGGGCGTC AAGGCGGGCG AACGCCTGCC GTCGGAACGG GCCCTGGCCG AACAGTTCGA GGTCAGTCGC ACCTCGGTGC GCGAAGCCAT CATTGCGCTG GAACTGCAGG GAGCCGTCGA GGTCAGGGGC GGCTCCGGCG CCTATGTGAT CCAGACCCCG GCGACGGCGA CACAAACCCC GGTCTTCATG CCAGAGGCAG GGCCGGGGCC GTTTGAGCTG TTGCGCGCAC GCTGCCTGAT CGAATCTGAA ATCGCCTCTG TGGCTGCGGA GACGCGCAAG GACGCCGATC TGGACCGCAT CTTCGAGGCC CTGGCCGATA TGCGCCTGCA CATGGACGAC AAGGTGGCCA ACGAAGCCGC CGACCGCCGG TTTCATCTGT ATATCGCGGA GTCCACCGGC AACAGCGTTT TGCTGCAGAT GGTGACCGCG ATGTGGGACC ATGCCAAAGG CCCCGTGTGG GCCAAGATTG ACCAGCACTT TCACAGCCCG GCCCTGCGCG TGTCGTCGCA GGAAGACCAT CAGCGCGTCT TCGATGCGCT GATGGCGCGA GACCCCGTAG CGGCACGCAC CGCCATGCGC GCTCACCTGG AGCGCGTGAT CAAGGAATTC GCCCAGGCCT GGCGCTAA
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Protein sequence | MNLQLIPAAA AKPSTEETDV ERPYLRLAAQ ILALLAHKGV KAGERLPSER ALAEQFEVSR TSVREAIIAL ELQGAVEVRG GSGAYVIQTP ATATQTPVFM PEAGPGPFEL LRARCLIESE IASVAAETRK DADLDRIFEA LADMRLHMDD KVANEAADRR FHLYIAESTG NSVLLQMVTA MWDHAKGPVW AKIDQHFHSP ALRVSSQEDH QRVFDALMAR DPVAARTAMR AHLERVIKEF AQAWR
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