| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3975 |
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| Symbol | |
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| ID | 4013342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4168054 |
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| End bp | 4168755 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637943624 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_550767 |
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| Protein GI | 91789815 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.208629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGCCG AGTTTCATTT CCAATCGATT TTCGCCAGCT GGCAGCTTTA TGCTGAAGGT
GCGTTGGGCA CGCTGGGGCT GGTGGTGTGC GTGATTCCGC TGGGATTTGC GCTGGCGGTG
GCGCTGGCGC TGGCGCGCAA GATCGCACCC CAGCCGATTC CCAGGCTCGT CACGCTCTAC
GTGGAGTTTT TGCGCAACAC GCCTTTTATT GTTCAGCTGT TCTATATCTA TTTCGGGCTG
GGCTCGATGG GGTTTCCAAT TCCGCCGGTG ATGGGAGCCT TGCTGGCCCT GATGCTCAAC
CTCAGTGCCT ATTCCACGGA AATCATCCGG GCCGGCATCG ACTCCATTCA CCGGTCCCAG
CTGGAGGCCG GGTTGTCCCT GGCCATGACG CGCGCCCAGC TCTACCGCCA TGTGGTCATC
ATGCCGGCGC TGGCGCGAGT CTGGCCAGCG CTCAGCAGCC AGTTCGTGCT GACCATGCTG
GCCACCAGCG TGTGCTCCTT CATTCCGGTG ACCGACCTGA TGGCCGCCAC CAAGTTTGTG
GAGTCCAACA CCTCACGCGG TTTTGAGGCC TACCTCATCC CCGCACCGAT TTACCTCACC
ATGGCGCTGC TGATGAAGTG GGGCCTGGCC ATGTTGGGCC GGGCACTGTT CCCGGCGCAG
CAGGACGCCA AAGCCAATGC GGTTTCGAAA GGCCTGGGAT GA
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| Protein sequence | MKAEFHFQSI FASWQLYAEG ALGTLGLVVC VIPLGFALAV ALALARKIAP QPIPRLVTLY
VEFLRNTPFI VQLFYIYFGL GSMGFPIPPV MGALLALMLN LSAYSTEIIR AGIDSIHRSQ
LEAGLSLAMT RAQLYRHVVI MPALARVWPA LSSQFVLTML ATSVCSFIPV TDLMAATKFV
ESNTSRGFEA YLIPAPIYLT MALLMKWGLA MLGRALFPAQ QDAKANAVSK GLG
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