| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3974 |
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| Symbol | |
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| ID | 4013341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4167398 |
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| End bp | 4168057 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637943623 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_550766 |
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| Protein GI | 91789814 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0732034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGATCG AAAGCTTCGG GTTTCCCGAA TTCATGTTTT TGATCCGGTC GCTGGGCTGG
ACGCTGGCGC TGACCGCCTC GTCACTCCTG CTGGGCAGTG TGATTGGTGC TTTTTTTGCG
ATTGCGCGGG TGTCTCACAA CAATCTGCTG CGCAATGCCG CGGTTCTCTA CATTCAGGTG
CTGCAGGGCC TGCCGGTTCT GCTGGTGTTG TTTCTGGCGT ATTTTGGGCT GGCCTATATG
GGTTTCGATC CGCCGGCCCT GGTCATCGCC ACCATCGCCC TGGGCCTGTA CGCCGGGGCC
TATCTGGCCG ACATCTGGCG TGGCGCGATG GAGTCGGTGC CCTACCAGCA ATGGGAAGCC
TCGTCCTCGC TGGCCATGAC ACGGGCCCAG CAGTTTCGCT TCATCATCCT GCCGCAGTCG
GTGCGTATTT CGCTGCCGCC CACGGTCGGC TTCCTGGTCC AACTGATCAA GAACACCTCG
ATCGTGTCCG TCGTGGGCTA CATCGACCTG ATGCGCGCCG GCGAGCACAT CGAGACCAGC
CTGCACTCCC CCTTCATGGT TTACGGAATC GTGGCGCTGC TGTATTTCTC GCTGTGCTTT
CCGTTGTCCC ACCTGAGCAA AATGTTAGAG AGGAAAGTAC ATGCCGATCG TCAAAATTGA
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| Protein sequence | MMIESFGFPE FMFLIRSLGW TLALTASSLL LGSVIGAFFA IARVSHNNLL RNAAVLYIQV
LQGLPVLLVL FLAYFGLAYM GFDPPALVIA TIALGLYAGA YLADIWRGAM ESVPYQQWEA
SSSLAMTRAQ QFRFIILPQS VRISLPPTVG FLVQLIKNTS IVSVVGYIDL MRAGEHIETS
LHSPFMVYGI VALLYFSLCF PLSHLSKMLE RKVHADRQN
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