Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3973 |
Symbol | |
ID | 4013379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4166686 |
End bp | 4167417 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637943622 |
Product | ABC transporter related |
Protein accession | YP_550765 |
Protein GI | 91789813 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.295954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCG TCAAAATTGA AAATGTCGTC AAGCGTTTTG GCGCCGTCGA GGTGCTCAAG GGTGTCTCGC TGGACGTGGA GGCGGGGCAG GTGGTGGCCA TCATCGGGCG CAGCGGTTCG GGCAAAAGCA CCTTGCTGCG CTGCCTCAAT GGACTGGAAA CGATTTACGC CGGAAACATC GACATTGCCG GCCACAGGCT CGACAACAGC GGCCGGCATT TGCGGGAACT GCGCAAGGAT GTGGGCATTG TGTTTCAAAG CTACAACCTG TTCCCCCACT TGACCGTGGG TGAAAACATC ATGCTGGCGC CGCGCATCAC CAAAGGCATC TCGCGGGAAG AAACCCGGCG CATTGCCGAG GCGACGCTGG CGCAGGTGGG ACTCTCGGAG AAATTCGGCG CCTACCCGGA GAAACTGTCC GGCGGGCAGC AGCAACGCGT GGCGATTGCG CGCTCGCTGG CCATGCAGCC CAAGGTCATG CTGTTCGATG AGGTGACCTC CGCGTTGGAT CCCGAGCTGA CGGGCGAGGT GCTGATCGTG ATGGAAAACC TGGCCAAAAA CGGCATGACC ATGCTGCTGG TGACGCACGA GATGGGTTTC GCCAAGGGCG TGGCCGACAT CACCGTCTTC ATGCACCAGG GCAAGGTCTG GGAGGCCGGC CCGTCAGAGC AACTCTTCGC CTCACCTCAA ACGCCCGAGC TCAGGCAGTT CATTGGCGGC AGCCTGAAAT AG
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Protein sequence | MPIVKIENVV KRFGAVEVLK GVSLDVEAGQ VVAIIGRSGS GKSTLLRCLN GLETIYAGNI DIAGHRLDNS GRHLRELRKD VGIVFQSYNL FPHLTVGENI MLAPRITKGI SREETRRIAE ATLAQVGLSE KFGAYPEKLS GGQQQRVAIA RSLAMQPKVM LFDEVTSALD PELTGEVLIV MENLAKNGMT MLLVTHEMGF AKGVADITVF MHQGKVWEAG PSEQLFASPQ TPELRQFIGG SLK
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