Gene Bpro_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3973 
Symbol 
ID4013379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4166686 
End bp4167417 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content61% 
IMG OID637943622 
ProductABC transporter related 
Protein accessionYP_550765 
Protein GI91789813 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.295954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCG TCAAAATTGA AAATGTCGTC AAGCGTTTTG GCGCCGTCGA GGTGCTCAAG 
GGTGTCTCGC TGGACGTGGA GGCGGGGCAG GTGGTGGCCA TCATCGGGCG CAGCGGTTCG
GGCAAAAGCA CCTTGCTGCG CTGCCTCAAT GGACTGGAAA CGATTTACGC CGGAAACATC
GACATTGCCG GCCACAGGCT CGACAACAGC GGCCGGCATT TGCGGGAACT GCGCAAGGAT
GTGGGCATTG TGTTTCAAAG CTACAACCTG TTCCCCCACT TGACCGTGGG TGAAAACATC
ATGCTGGCGC CGCGCATCAC CAAAGGCATC TCGCGGGAAG AAACCCGGCG CATTGCCGAG
GCGACGCTGG CGCAGGTGGG ACTCTCGGAG AAATTCGGCG CCTACCCGGA GAAACTGTCC
GGCGGGCAGC AGCAACGCGT GGCGATTGCG CGCTCGCTGG CCATGCAGCC CAAGGTCATG
CTGTTCGATG AGGTGACCTC CGCGTTGGAT CCCGAGCTGA CGGGCGAGGT GCTGATCGTG
ATGGAAAACC TGGCCAAAAA CGGCATGACC ATGCTGCTGG TGACGCACGA GATGGGTTTC
GCCAAGGGCG TGGCCGACAT CACCGTCTTC ATGCACCAGG GCAAGGTCTG GGAGGCCGGC
CCGTCAGAGC AACTCTTCGC CTCACCTCAA ACGCCCGAGC TCAGGCAGTT CATTGGCGGC
AGCCTGAAAT AG
 
Protein sequence
MPIVKIENVV KRFGAVEVLK GVSLDVEAGQ VVAIIGRSGS GKSTLLRCLN GLETIYAGNI 
DIAGHRLDNS GRHLRELRKD VGIVFQSYNL FPHLTVGENI MLAPRITKGI SREETRRIAE
ATLAQVGLSE KFGAYPEKLS GGQQQRVAIA RSLAMQPKVM LFDEVTSALD PELTGEVLIV
MENLAKNGMT MLLVTHEMGF AKGVADITVF MHQGKVWEAG PSEQLFASPQ TPELRQFIGG
SLK