| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3969 |
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| Symbol | |
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| ID | 4013375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4162143 |
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| End bp | 4162904 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637943618 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_550761 |
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| Protein GI | 91789809 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCA ACATCATGAC TCCCCCCATT CAGGACCAGG TCGCCCTCGT CACCGGCGCC
AACGCCGGCA TGGGCCTGGC CACCGTCCGC GCCCTGCTCG ACGCAGGCTA CCGTGTGGCC
GCCACCGACT TGCGGACCGA CCAGGTCGCC AGCTTGCTGG CAGCGCACGA CGACCGGCTG
GCCTGCTTCA CCATGGACGT GAGCGACCAG GCCCAGGTGC ATGCGGCCTG CGACCAGATC
GAGGCGCGTT TTGGCCGCAT CGATGTGTGC GTGAACAATG CCGGTTTCCT GCAGTACGCC
AACTGCGAAC AGACCACCCC CGAACTCTGG CGCAAGACCC TGAGCATCAA CCTCGACGGC
GTGTTTTACG TGAGCCAGCG CGTGGCGCCG GGCATGAAGG CACGCGGCTT TGGCCGCATC
GTCAACGTGT CGTCCTACGG CGCCAAAACC GGCGGTCTGT CGCCGCTGCC GGCCTACGCG
GCCAGCAAGG GCGGCGTGAT TTCGCTGACC TTCAGCTTCG CGCGCGAATA CGCCCCGTTT
GGTGTGACCT GCAACGCCCT GGCCCCGACC TTCGTCAAGA CCCAGATGCT GACCGAACAG
GTCAGCGCCG AGCGGCAAGC CGAGCTGCGC CAGAAAATCC CGGTGGGCCG CTTTTGCGAG
CTCGAGGAAT TTGCCCATAG TGTGCTGTTT CTGGCGCATC CCTTAAGCGG TTTCATCACC
GGCGAGGTGC TGGACCTCAA CGGCGGCCTG CAGTTCGATT GA
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| Protein sequence | MSFNIMTPPI QDQVALVTGA NAGMGLATVR ALLDAGYRVA ATDLRTDQVA SLLAAHDDRL
ACFTMDVSDQ AQVHAACDQI EARFGRIDVC VNNAGFLQYA NCEQTTPELW RKTLSINLDG
VFYVSQRVAP GMKARGFGRI VNVSSYGAKT GGLSPLPAYA ASKGGVISLT FSFAREYAPF
GVTCNALAPT FVKTQMLTEQ VSAERQAELR QKIPVGRFCE LEEFAHSVLF LAHPLSGFIT
GEVLDLNGGL QFD
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