| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3966 |
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| Symbol | |
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| ID | 4013372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4157935 |
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| End bp | 4159329 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637943615 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_550758 |
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| Protein GI | 91789806 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.352958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAG TTGCTTTCCT GTTCCTGATG AGCGGCGGCC TGCCGGTGGC CATGGCCATG
GCCGGCGCTT CGCTCCTCTA CATCCTGTTC ACCCAAAGCT CGCCGCCCTT TGTGGTGATT
CACCGCATGG TCAGCGGCAT TGACAGCTTT CCGCTGCTGG CCGTGCCTTT CTTCATTCTG
GCCGGCAACC TGATGAACAA CGCCGGCATC ACCAACCGCA TCTACAACTA CGCGCTGGCG
CTGGTGGGCT GGATGAAGGG CGGGCTGGGC CATGTCAACG TCGTGGGCTC GGTGGTGTTT
GCCGGCATGA GCGGCACCGC CATTGCCGAC GCGGCCGGTC TGGGCACGAT CGAGATCAAG
GCCATGAAGG ACCACGGCTA CAGCACCGAA TTTGCCGTGG GCGTGACGGC GGCTTCCGCC
ACGCTGGGCC CCATCATTCC GCCCAGCCTG CCCTTTGTGA TCTACGGCAT GATGGCCAAC
GTCAGTGTTG GCGCCCTGTT TCTGGCCGGC ATACTGCCGG GCGTCATGAT GGCCATCCTG
ATGATGCTCA CCGTGGCTTA CTTCGCGCAC AAGAACGGCT GGGGCGCCGA CGTCAAGTTC
GATTGGCGCC GCCTGAGCAA GGCGCTGATC GAAACCGCGG TGGTCATCGG CTGGCCGCTG
CTGCTGTGGC TGCTGATTGG CAAGCTTAAC TTTCCGCCGC AAGTCACCGT GGCCGCCGCG
CTGGTGGCGC TGTTTGCGGC CGACAAGGCG TTCAAGTTCC AGGCCGTTCT GCCCATCATG
ACGCCGGTGC TGCTGATCGG CGGCATGACG ACCGGCATCT TCACGCCCAC CGAAGGCGCA
ATTGCCGCCT GCGTCTGGTC GCTGATCCTC GGCTTTGCCT GGTATGGCAC GTTGACCTTC
AAGAGTTTCG TGAAGGTCTG CCTGGATACG GTAGAGACGA CAGCCACCGT GCTGTTCATC
GTGGCCGCGG CGTCCATCTT CGGCTGGATG CTCACCGCCA CCGGCGTGAC CACCGACATT
GCCAACTGGG TGCTGGGTTT CACCAAGGAG GCCTGGGTCT TCCTGCTGCT GGCCAATGTG
CTGATGCTGT TTGTGGGCTG CTTCCTGGAG CCGACGGCGG CCATCACGAT TCTGGTGCCC
ATCCTGGTGC CCATCGCCGT GCAGCTGGGC GTTGACCCCG TCCATTTCGG GCTGGTGATG
GTGCTCAACC TGATGATAGG CCTGCTGCAC CCACCCATGG GCATGGTGCT GTTTGTGCTG
GCGCGCGTGG CCAAGCTCTC GGTCGAGCGC ACCACCATCG CCATTCTGCC CTGGCTGTTT
CCGCTGCTGG GCAGCCTGAT TGTCATTACC TACTTCCCCA AGCTGGTGCT GTGGCTGCCC
AAGATGTTTT ATTGA
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| Protein sequence | MLKVAFLFLM SGGLPVAMAM AGASLLYILF TQSSPPFVVI HRMVSGIDSF PLLAVPFFIL
AGNLMNNAGI TNRIYNYALA LVGWMKGGLG HVNVVGSVVF AGMSGTAIAD AAGLGTIEIK
AMKDHGYSTE FAVGVTAASA TLGPIIPPSL PFVIYGMMAN VSVGALFLAG ILPGVMMAIL
MMLTVAYFAH KNGWGADVKF DWRRLSKALI ETAVVIGWPL LLWLLIGKLN FPPQVTVAAA
LVALFAADKA FKFQAVLPIM TPVLLIGGMT TGIFTPTEGA IAACVWSLIL GFAWYGTLTF
KSFVKVCLDT VETTATVLFI VAAASIFGWM LTATGVTTDI ANWVLGFTKE AWVFLLLANV
LMLFVGCFLE PTAAITILVP ILVPIAVQLG VDPVHFGLVM VLNLMIGLLH PPMGMVLFVL
ARVAKLSVER TTIAILPWLF PLLGSLIVIT YFPKLVLWLP KMFY
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