Gene Bpro_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3947 
Symbol 
ID4013392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4136735 
End bp4137835 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content68% 
IMG OID637943596 
ProductABC transporter related 
Protein accessionYP_550739 
Protein GI91789787 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0174728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTC TGACCCTGGC GAATGTGAAC AAGTCCTATG GCGCCACGCA CGCCGTGATC 
GACATGAACC TGTCGGTGGA GAAGGGCGAA TTTGTCTCGC TGCTCGGGCC TTCGGGCTGC
GGCAAGACCA CGACGCTGCA AATGATTGCC GGTTTTGCCG ATGTCACCGC CGGCCGCATC
ACGCTCGATG GCCGTGACAT CACCCACGCC AAACCGAACA CGCGCGGCCT GGGTATCGTG
TTTCAGAGCT ATGCGCTGTT CCCCCACATG AGCGTGCACG ACAACGTGAG CTTTGGCCTG
GAGATGCGGC GTATGCCCAA AAACGAGCGC ACCGAACGCG TCAAGGCCGC GCTGGCGCTG
GTGCACCTGG AGGCGCACGC CACGCGCTAC CCGCGCGAGC TGTCCGGCGG CCAGCGCCAG
CGGGTGGCCC TGGCCCGCGC CCTGGTCATC GAGCCGCCGG TGCTGCTGCT CGACGAGCCG
CTGTCCAACC TCGACGCCAA GCTGCGCGAG GAAATGCAGT TCGAGCTGCG GCAGATCCAG
CGCAAGGTGG GCACCACCAC CGTGATGGTC ACGCACGACC AGACCGAGGC CATGTCCATC
AGCGACCGCG TGGTGGTGAT GGAGGCCGGC CGCGTCACGC AGATCGACCA GCCGCACCGC
CTGTACGAAC ACCCGCAAAC GCGTTTCATC TCCAGCTTTG TCGGCAAGGC CAACCTGCTG
GAAGGCCGCG TCATCGCTAC CGGTGCCTGG GCCACGGTGG ACCTGGGCAC GGCGTCGCTG
GAGGTCCATG CGCCCGGCGC CGCCGTGGGC GACGCCGTGG TGCTCAGCCT GCGGCCCGAA
AAAATCCGCC TCGTGCCCGA GACCCGGGGT CGCCTCGCGG GCGCGGTGTG CGAGCGCTTC
TTCCTGGGCA GCCAGTGGCT CTACCAGGTA GACACCGCCG CCGGTGAGCT GGTGGTGGTC
TGCCCCAACG ATGGCGAAGT GCCTGCCGAA GAAGGCCAGC GCGTCGGCCT CGACTGGCCG
GCCGGCCAGG TGCGCCTGTT GCCCGGCGCG CTGCATCTGC AAGTGCCTGC CGCACCGGCG
ACGCTGGAGG CCGTGGCATG A
 
Protein sequence
MSFLTLANVN KSYGATHAVI DMNLSVEKGE FVSLLGPSGC GKTTTLQMIA GFADVTAGRI 
TLDGRDITHA KPNTRGLGIV FQSYALFPHM SVHDNVSFGL EMRRMPKNER TERVKAALAL
VHLEAHATRY PRELSGGQRQ RVALARALVI EPPVLLLDEP LSNLDAKLRE EMQFELRQIQ
RKVGTTTVMV THDQTEAMSI SDRVVVMEAG RVTQIDQPHR LYEHPQTRFI SSFVGKANLL
EGRVIATGAW ATVDLGTASL EVHAPGAAVG DAVVLSLRPE KIRLVPETRG RLAGAVCERF
FLGSQWLYQV DTAAGELVVV CPNDGEVPAE EGQRVGLDWP AGQVRLLPGA LHLQVPAAPA
TLEAVA