| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3946 |
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| Symbol | |
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| ID | 4013391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4135699 |
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| End bp | 4136577 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637943595 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_550738 |
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| Protein GI | 91789786 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0687674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.554562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGGAG CTGCACCGAA TGTTTCGCGG CCCTCGGCGG CCCGCGCACC ATGGCTGCTG
TCGGCGCCGG CCTTTGTGCT GTTTGCCTGC CTGCTGCTGG TGCCCCTGGC GCTCACGGCC
GTGCTGTCCT TCCAGGTGTT CGACCACGCC ACCGGCGTCA AGAACAGTTT CACGCTGGCG
CATTACGCCG CGGTGCTGAC GGACGACTAC TACCACCGCA TTTTCTGGCG CACCTTCTGG
GTCTCGGCGC TCACCACGCT GATCTGCGTG CTGGTCGGCG CGCCCGAGGC CTATGTGCTC
AGCCGCATGC GCAACCCGTG GCGCTCTGTC TTGCTGCTGG TGGTGCTGGC GCCACTGCTG
GTGTCGGTGG TGGTGCGCGC ATTTGGCTGG AGCATGCTGC TCGGGCCCGA GGGCGTGGTG
AACCAGGCCG TGCGCGCCAT GGGCCTGCCG CCCATGCGCA TCCTCTACAC CGAAGCCGCC
GTGGTCATTG CGCTGGTGCA TGTGATGCTG CCCTTCATGG TGATCCCGGT CTGGACCTCG
CTGCAAAAAC TAGACCCCGG CGTGGAAGAT GCCGCGCTGT CGCTCAAGGC CTCGCATTTC
ACCACCGTAC GCCGCATTAT TTTTCCGCAG GTGCTGCCCG GCGTTCTTTC GGGCAGCCTG
ATCGTCTTCG GCCTGAGCGC CAGCGCCTTT GCCATTCCCG GCCTGCTGGG CGGGCGGCGC
CTGAAGATGG TGGCCACCGT GGTGTACGAC GAGTACCTGC ACGAGCTCAA CTGGCCGCTG
GGCGCGGCGA TTGCGCTCAC GCTGCTGCTG GCCAACCTGG TGCTGATGCT CAGCTACAAC
CGGGTGCTCG AGCGCTCCTA CAAAAAATCA ATGGGTTAA
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| Protein sequence | MVGAAPNVSR PSAARAPWLL SAPAFVLFAC LLLVPLALTA VLSFQVFDHA TGVKNSFTLA
HYAAVLTDDY YHRIFWRTFW VSALTTLICV LVGAPEAYVL SRMRNPWRSV LLLVVLAPLL
VSVVVRAFGW SMLLGPEGVV NQAVRAMGLP PMRILYTEAA VVIALVHVML PFMVIPVWTS
LQKLDPGVED AALSLKASHF TTVRRIIFPQ VLPGVLSGSL IVFGLSASAF AIPGLLGGRR
LKMVATVVYD EYLHELNWPL GAAIALTLLL ANLVLMLSYN RVLERSYKKS MG
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