Gene Bpro_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3935 
Symbol 
ID4013380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4125809 
End bp4126564 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content64% 
IMG OID637943584 
Productbeta-lactamase-like 
Protein accessionYP_550727 
Protein GI91789775 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.361961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTTA GACAACGAGC GGCGGAGAGC GCCACCCTCT CTTATTTCTT TGGATGCGCG 
AGCCTGGCAA AGGCGGTAGC CGTTGACGTG GTCGCTGGCG ACGAGGACTG GTTCATCGCC
GAGGCCGAGA AGGCAGGCGT CAGGATTGCT CACGTCATCG ACACCCATGT TCATGCCGAC
CACTACTCGG GTGGCCCCGC GCTGGCACGG CGGGTCGGCG CGCCGTATTA CCTGCACGAG
AGCAACAAGG GACGGGTCAT GTTCGAATTC GCGCCCGTCA AGGACGGCCA GCGCCTCGAG
GCTGGCAACG TGGTGGTCGA CATTCTGCAT ACCCCGGGGC ACACGCCAGA CAGCATCTGT
CTGCTGGTAC GAGACCTGCG CCGGGGCGAC GAGCCCTGGT TCGTCATCAC CGGCGACACC
TTGTTCGTTG GCGCCGCAGG ACGACCGGAT TTGGCGGGCC GCGAGCGGGA GATGGCGGGT
CAACTGCACG ATACCTTGCA TGCCAAGCTG CTGACCCTGC CTGCCGACCT CGAAATCTTT
CCTGGTCACC AGGCCGGCAG CGCCTGCGGT GTCGGCCTGT CTGGCAAGCC CTCATCGACC
ATCGGTTTTG AGAGGCGCTT CAACCCCATG CTCTCGATGT CTCGCGAAGC ATTCGTCAAG
GCGCTCACGG CCGACATTCC GCCGCAGCCT CAGGACATGG CCCGCATCGT AGAGGCCAAC
CTGCATGGCA GGGCACCGGA GCCGGCGCAC GCCTGA
 
Protein sequence
MFFRQRAAES ATLSYFFGCA SLAKAVAVDV VAGDEDWFIA EAEKAGVRIA HVIDTHVHAD 
HYSGGPALAR RVGAPYYLHE SNKGRVMFEF APVKDGQRLE AGNVVVDILH TPGHTPDSIC
LLVRDLRRGD EPWFVITGDT LFVGAAGRPD LAGREREMAG QLHDTLHAKL LTLPADLEIF
PGHQAGSACG VGLSGKPSST IGFERRFNPM LSMSREAFVK ALTADIPPQP QDMARIVEAN
LHGRAPEPAH A