Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3926 |
Symbol | |
ID | 4013410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4119185 |
End bp | 4119538 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637943576 |
Product | alkylhydroperoxidase AhpD core |
Protein accession | YP_550719 |
Protein GI | 91789767 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.119632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAT TTGACCATGT GGGCCTGATA CAGGATATCA ATGAAGGCCT CGGGCAGTTT CGCAAGGCGC AACCCGAGGC GATGCAGGGG TTTGGGCAGC TCTCGCGAGC CGCGATGTCG GAGGGCACCC TCAGCGCCAG GCACAAGGAG CTGATGGCCC TGGCGATTGG AGTGACCCAG CACTGCTCGG GCTGCATCGC TTTTCATGTG AAAGCCCTGC ACAAACTGGG CTGCACCCGC GCCGAGCTGG AGGAAACGCT GGCCGTGTGC GTGTACATGG GCGGTGGTCC GGCCCTGATG TACACGGCCG AGGCCCTCAA AGCCTGGGAG GCCATGGCGC CAGATCTCAC CTGA
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Protein sequence | MSTFDHVGLI QDINEGLGQF RKAQPEAMQG FGQLSRAAMS EGTLSARHKE LMALAIGVTQ HCSGCIAFHV KALHKLGCTR AELEETLAVC VYMGGGPALM YTAEALKAWE AMAPDLT
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