Gene Bpro_3926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3926 
Symbol 
ID4013410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4119185 
End bp4119538 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content63% 
IMG OID637943576 
Productalkylhydroperoxidase AhpD core 
Protein accessionYP_550719 
Protein GI91789767 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.119632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAT TTGACCATGT GGGCCTGATA CAGGATATCA ATGAAGGCCT CGGGCAGTTT 
CGCAAGGCGC AACCCGAGGC GATGCAGGGG TTTGGGCAGC TCTCGCGAGC CGCGATGTCG
GAGGGCACCC TCAGCGCCAG GCACAAGGAG CTGATGGCCC TGGCGATTGG AGTGACCCAG
CACTGCTCGG GCTGCATCGC TTTTCATGTG AAAGCCCTGC ACAAACTGGG CTGCACCCGC
GCCGAGCTGG AGGAAACGCT GGCCGTGTGC GTGTACATGG GCGGTGGTCC GGCCCTGATG
TACACGGCCG AGGCCCTCAA AGCCTGGGAG GCCATGGCGC CAGATCTCAC CTGA
 
Protein sequence
MSTFDHVGLI QDINEGLGQF RKAQPEAMQG FGQLSRAAMS EGTLSARHKE LMALAIGVTQ 
HCSGCIAFHV KALHKLGCTR AELEETLAVC VYMGGGPALM YTAEALKAWE AMAPDLT