| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3915 |
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| Symbol | |
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| ID | 4013399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4109601 |
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| End bp | 4110383 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637943565 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_550708 |
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| Protein GI | 91789756 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.240157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCTTC TCACCCCATC CCCGCAAATG GGCTCACCCC GCCTGCCCCT GATCGGGCCG
CAGACCGCAC TTTTTCTCGA CTTCGACGGC ACACTGGCTG ACTTGGCGCC GCAGCCCGGG
GCCGTGCAGG TGACCGCAGG GTTGATTCCC ACCCTGGCCC AGCTTGCGAC CCGGCTCGGT
GGCGCGCTGG CCATTGTGTC GGGGCGCACA CTCACGGACC TGGACCGGTT TCTCGACCCC
CTGCAACTGG CCGCCGCGGC CGAGCACGGA GCGCAGCGCC GCCAGGCAGA TGGCCAGGTG
GTCAGCGTGG CCGCCCCCGA TTTGCAGGAG GTGGTGCGCC GAGCCGAGGC GCTGGCTGCA
CGCCATCCCG GCCTGTACCT CGAAATCAAG TCCGCGGCCG TCGCCCTGCA CTACCGCCAT
GCCCCCGACC TCGAAACGCT GGCGTTGCAG GTCATGCGGG AAGCGGCCAA CAGCACACCG
GGCGCAGAAT TGCTGCAGGG CAAGTATGTC TTTGAAATCA AACCGGCCGG CGTCAGCAAG
GGCACGGCCA TTGAGGCTTT CATGGGAGAA ATGCCGTTTG TGGGTCGCCT GCCCCTGTTC
GCCGGCGACG ACGTGACCGA TGAAGCCGGG TTCTCCGTGG TGCAGTTCCT CGGCGGCCAA
GGCATCAAGG TTGGCGAAGG CGCCACCCTG GCCAGGCACC GGTGCGCGGC GCCGGCCGCA
CTGCGGCAGT GGCTGCAGGC TGCCAGCCAG AATTCGGGCC ACTGGCGCGG GATCAGCCCA
TGA
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| Protein sequence | MQLLTPSPQM GSPRLPLIGP QTALFLDFDG TLADLAPQPG AVQVTAGLIP TLAQLATRLG
GALAIVSGRT LTDLDRFLDP LQLAAAAEHG AQRRQADGQV VSVAAPDLQE VVRRAEALAA
RHPGLYLEIK SAAVALHYRH APDLETLALQ VMREAANSTP GAELLQGKYV FEIKPAGVSK
GTAIEAFMGE MPFVGRLPLF AGDDVTDEAG FSVVQFLGGQ GIKVGEGATL ARHRCAAPAA
LRQWLQAASQ NSGHWRGISP
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