| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3907 |
|---|
| Symbol | |
|---|
| ID | 4013431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4103001 |
|---|
| End bp | 4103477 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637943558 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_550701 |
|---|
| Protein GI | 91789749 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1607] Acyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0682264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.490701 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTCG AATCAAGCGC CAGCCCGGGT ATCCACGCCA AAGCCGCCGC TGCGGCGGTC
GCTGAGGCCG CCGAGGCTGC AGATGCCCTC AGCGTCCAGT TGCCCACCGA CAAGGAGCTG
GTTCTCAAGG TGATTCCAAT GCCGGCCGAC TGCAACGCCA ATGGCGACAT TTTTGGCGGC
TGGGTCATGG CCCAGGTCGA CCTGGCGGGC TCGGTGGTGC CGGCCCGCCA CGCAGGCGGC
CGCTTGGCGA CCGTGGCCGT CAACCAGTTC ATCTTCAAGC AGCCGGTCAG GGTGGGCGAC
ATCCTCTCCT TTTTTGCCAG CCTCACCCGC ATTGGCACGA CCTCGATCAC GGTGCAGGTC
GAGGTGTATG CCGAGCGCTT TCGCGCACAG GGCCGCTACA TCAAGGTCAC CGAGGCCAGC
CTGACCTATG TGGCGATCGA CGATTTCGGC AAGCCGCGCA AGATTGCCAG CACCTGA
|
|---|
| Protein sequence | MSFESSASPG IHAKAAAAAV AEAAEAADAL SVQLPTDKEL VLKVIPMPAD CNANGDIFGG
WVMAQVDLAG SVVPARHAGG RLATVAVNQF IFKQPVRVGD ILSFFASLTR IGTTSITVQV
EVYAERFRAQ GRYIKVTEAS LTYVAIDDFG KPRKIAST
|
|---|
| |