| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3904 |
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| Symbol | |
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| ID | 4013428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4098271 |
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| End bp | 4099167 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637943555 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_550698 |
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| Protein GI | 91789746 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000111161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.107896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA AACTAGCCGC TCTGTCCATC GCCTTGCTCG CAACCGGCGG TGCCATCGCC
CAGGCGAACG ACACCATCGC CAAGGTCAAG GCCTCAGGCG TGGTGACCAT GGGGGTGCGC
GACTCGTCCG GTCTTTCCTT TACCCTCGGT GACGGCAAGT ACGCCGGTTA CCACGTTGAC
GTGTGTCAGC GCATTCTGGC CAGACTCGAA AAAACGGTAG GCAAGAAACT GGAAGTGAAA
TACCTGCCGG TGACATCGCA AAACCGCATT CCCCTGGTGC AAAACGGCAC GGTCGATATT
GAGTGCGGCT CCACCACCAA TAATGCGACG CGCCAAAAAG ATGTTGCGTT TGCTGTGACC
ACCTTTGTTG AAGAGGTTCG CATTGCGGTG AAAGCCGACT CAGGCATTAC GTCTATCGCC
CAGCTCAATG GCAAAAGCGT GGCCACCACC ACCGGCACCA CCTCCGTCCA GACCTTGCGC
AAAAACGAGC GCGCCACCGG CATTGACTTC AAGGAAGTCT TCGGCAAAGA CCACTCCGAC
AGCTTTCTGC TGCTGGAGTC CGGCCGTGCC GATGCATTTG TCATGGATGG CTCCATCCTG
GCCAGCAACA TCGCCAACTC CAAGAACCCC GCCGGCTTCA AGATCGTCGG TGAAGTACTG
AGCGTTGAGC CGATTGCCAT CATGATGCGC AAAGATGACC CGGCGTTCAA AAAATTGTCG
GATGACACCA TCAAGGACCT GATCAAGTCC GGCGAGCTGG CAAAAATATA TGACAAGTGG
CTCATGCAAC CTGTTCCACC GAAAAATGTA CGCGTTGGGT TGCCAGCCAG CGACAGCACC
AAGGCTGCTT GGGCAACGCC TAACGACAAG CCCATGGAAG ATTACGCCAA AAAGTAA
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| Protein sequence | MKLKLAALSI ALLATGGAIA QANDTIAKVK ASGVVTMGVR DSSGLSFTLG DGKYAGYHVD
VCQRILARLE KTVGKKLEVK YLPVTSQNRI PLVQNGTVDI ECGSTTNNAT RQKDVAFAVT
TFVEEVRIAV KADSGITSIA QLNGKSVATT TGTTSVQTLR KNERATGIDF KEVFGKDHSD
SFLLLESGRA DAFVMDGSIL ASNIANSKNP AGFKIVGEVL SVEPIAIMMR KDDPAFKKLS
DDTIKDLIKS GELAKIYDKW LMQPVPPKNV RVGLPASDST KAAWATPNDK PMEDYAKK
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