| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3888 |
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| Symbol | |
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| ID | 4013451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4081068 |
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| End bp | 4081973 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637943539 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_550682 |
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| Protein GI | 91789730 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.721078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAACCG CGGTTGCCGC CCCGGGAATT GGCACAACAC CAGCCTCAAC GCAGGCCCGG
CTTATCCTTT TCCTGTTGCT GGCGCCTGCG CTGATCTGGC TGGTGGGCCT GATTGTGCTG
CCGCACATCG ATCTGGCGGT GCTGTCGCTG CGCGAGCGCA TCGCGCCGCG GCAGTACACG
CCCAGCATCG CCCAGTACCG CACCTTCATT GAAGAGCCGC TGTACTGGCA CACCTTTGTG
CGGACAGCCG TCATGTCCAT CCTGGCCACA CTGATCACGC TGCTGCTGGC CTTTCCGGTG
GCCTGGACCA TTGCCAAGCT GGTGCGCGGC CGCGCCAAGT CCTTGCTGCT GGTGCTGTGC
CTGATCCCCT TCTGGGTCAG CGAAACCGTG CGCACCTTGG GGTGGATGAT CCTGCTGCGC
GAGTCCGGCG TGCTGCCCGC CCTGCTGGTG CAACTCGGCC TCACGGCAAC CCCTGTGGAA
ATGCTTTACC GGGATGCCAC CATTCTGGTG GGCCTGGTGT ACACCTCCAT GCTGTTCATG
GTGGTGCCGC TGATCAGCGC CCTGGAAAGC CTGGACGACG CCCTGATTGA AGCGGCCTAC
GATCTGGGAG GCACCGGCCC CTCCATCCTG CGCCAGATCG TGATTCCGCA CGCGGCGCCC
GGAATTCTGG CCGGCTGCAT CGTGGTCTTC ATGCTGACCC TGGGCAACTA CCTCACGCCC
ACCTTGCTGG GCGGCAAAAA CTCGCTATGG TTTACCGAGC AGATTTACAC CCAGTTCATT
ACCCGTTTCA ACTGGGAACA GGGCGCTGCC TTCGGCTTTT TGCTGCTGGG GCTGTCCACC
GCCATCGTCT GGCTGGGCCT GAAGCTCACG GGCCAGAAAT TCGGTGAAGT GATGAGGAAG
ACATGA
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| Protein sequence | MQTAVAAPGI GTTPASTQAR LILFLLLAPA LIWLVGLIVL PHIDLAVLSL RERIAPRQYT
PSIAQYRTFI EEPLYWHTFV RTAVMSILAT LITLLLAFPV AWTIAKLVRG RAKSLLLVLC
LIPFWVSETV RTLGWMILLR ESGVLPALLV QLGLTATPVE MLYRDATILV GLVYTSMLFM
VVPLISALES LDDALIEAAY DLGGTGPSIL RQIVIPHAAP GILAGCIVVF MLTLGNYLTP
TLLGGKNSLW FTEQIYTQFI TRFNWEQGAA FGFLLLGLST AIVWLGLKLT GQKFGEVMRK
T
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