| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3886 |
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| Symbol | |
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| ID | 4013449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4078858 |
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| End bp | 4079934 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637943537 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_550680 |
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| Protein GI | 91789728 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.768061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAT CTCGCCTGAT GCGCCTCATG ATGGGGGCCG GTCTGCTTGC TTCTAGCCTG
GCCAATACGG CTTGGGCTCA GGATCAGAAA CTGCGGCTGA TTACCTGGGC GGACTACGTG
CCGGCTGATG TTGTGGCGCA GTTCAAAAAG GAAACAGGAA TTGACGTCGA GCTCACCCTG
TCGAACAACG AGGAGATGAT CTCCAAATTG CGCGCCACCG GCGGTGCGGG TTTTGACCTG
GCCCAGCCCT CACAGGACCG CATCACCGGC CCGCAGCAGG AGTTTGGTAT TTACAAACCC
ATGGACCTGA GCAAGATCAA GTCCGAGCTG TTCATTCCTG CCATGCTCGA CGCCACCAAA
AAGAACACCA CGCTGGCCGG CAAGGTCTAT GGCCTGCCGC ACATCTGGGG TACCGACGGC
CTGGTGGTCA ACACCCAGTT GGCGAAGATG AGCGACTACC CCGATTTGTG CAAAGCCGAT
GTCAAGGGAA AGACCGCCGT TCGCCTCAAG CGGCCCACCC TGCTGGCATT TGCCTTTGCC
TCCGGCAAGG ATCCGTTTGC ACTTTACAAA GACCCAAAAG CCTATGGCGC GCTGATGGAC
GAAGTCGGCA AAACCATGAT CGCCTGCAAG AGCAACATCA AGTTTTACTG GGACAACAAG
GACCAGCTGC TCAACGGCAT GCGCACCGGC GAAGTGGTGG GCGCCATGAT GTGGGATACC
GGCGGCTGGA AGCTCAACAG TGAAAAACCC GAAATCCAGT ACATCGCCCC CAAGTCGGGC
GCGCTCGGCT GGATAGACAC CTTTGCCATC CCCGCCAAAG GCCGCAATGA TGCTGCCGCG
TATGCCTGGA TCAACTTCAA CATGCGTCCG GAAATCGCTG CCAAGGTGGC GGGCTCCGCC
GGCAACTTCA CCGCCGCCAA AGGCGCTGAC CAGCTGATGG ACGCCAAGCT CAAGGCCCAG
TTCGCCGCCA GCTTCCCGGA AGCCGCCCTG AAGAACGTCA AATGGTATCC GGCCGTACCG
GCCGGCATCG AAGACATCGA GGGCCGTGTG CTGGACCGCA TCAAGGCCGC CCGGTAA
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| Protein sequence | MKLSRLMRLM MGAGLLASSL ANTAWAQDQK LRLITWADYV PADVVAQFKK ETGIDVELTL
SNNEEMISKL RATGGAGFDL AQPSQDRITG PQQEFGIYKP MDLSKIKSEL FIPAMLDATK
KNTTLAGKVY GLPHIWGTDG LVVNTQLAKM SDYPDLCKAD VKGKTAVRLK RPTLLAFAFA
SGKDPFALYK DPKAYGALMD EVGKTMIACK SNIKFYWDNK DQLLNGMRTG EVVGAMMWDT
GGWKLNSEKP EIQYIAPKSG ALGWIDTFAI PAKGRNDAAA YAWINFNMRP EIAAKVAGSA
GNFTAAKGAD QLMDAKLKAQ FAASFPEAAL KNVKWYPAVP AGIEDIEGRV LDRIKAAR
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