Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3885 |
Symbol | |
ID | 4013448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4077828 |
End bp | 4078691 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637943536 |
Product | TatD-related deoxyribonuclease |
Protein accession | YP_550679 |
Protein GI | 91789727 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.932753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCT GGATTGACAC ACACTGCCAC CTCGATGCCG GGGAGTTCTC GCCAGATGTG GCCGCAGTTC GTGCGCGGGC TACCGTCAGG CAGGTCGCGC ATTGCGTGCT GCCGGCTGTG GCAGTCAGCA ACTTCGCGGC CGTGCGCTTG CTGGCGCATG AGTTTTCGGA CAGTTACGCA TTGGGCATAC ATCCGCTTTG CGTGCCCGAA GCACAAGAGG CCGACCTGCT GGCGCTGGAT GCGGAACTGA CCCTCAGAAA GTCCGACCCG CGCCTGGTGG CGGTGGGTGA AATAGGGCTT GACTATTTTG TGCCCGCATT GACGCAAAGC CCCATGCGCG AGCGCCAGGA ATATTTCTAC CGCGAGCAGC TCAAGCTGGC GCGCAAGCAC GGCTTGCCGG TCATCCTGCA TGTGCGGCGA TCGGCCGACA AGCTGCTCAA ACATTTGCGT GAGCTGGTGC CCCATCACCC GGAGCACCCG GAGGACGGCT GGCGTGGCAT TGCCCATGCC TTTAACGGCA GCGAACAGCA GGCGATGGAG TTCGTCAAGC TGGGTTTCAA GCTGGGCTTT GGCGGTGCCG TCACGTTTGA GCCCGCCCGG CAGCTCAGGC ACCTGGCCGC CCAGTTGCCG CTGGAGGTGC TGGTGATGGA AACCGATTCA CCCGACATTC CACCGCACTG GCTTTACACC ACGGCAGCGC AGCGTGCGGC CGGGCAGGGC CAGGGCCGCA ATGAGCCGGG CGAGTTGCCC CGCATTGCAC AGCAAGTGGC GAGTCTGCGC GGCATCTCGG CCGAAGCGTT GGCCAGCGCC ACCAGCGCCA ACGCGCTAGA GGCGCTGCCC CGGCTCAAGG CGCTCGTGTC GTGA
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Protein sequence | MTFWIDTHCH LDAGEFSPDV AAVRARATVR QVAHCVLPAV AVSNFAAVRL LAHEFSDSYA LGIHPLCVPE AQEADLLALD AELTLRKSDP RLVAVGEIGL DYFVPALTQS PMRERQEYFY REQLKLARKH GLPVILHVRR SADKLLKHLR ELVPHHPEHP EDGWRGIAHA FNGSEQQAME FVKLGFKLGF GGAVTFEPAR QLRHLAAQLP LEVLVMETDS PDIPPHWLYT TAAQRAAGQG QGRNEPGELP RIAQQVASLR GISAEALASA TSANALEALP RLKALVS
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