Gene Bpro_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3879 
Symbol 
ID4013442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4071039 
End bp4072367 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content66% 
IMG OID637943530 
Producthypothetical protein 
Protein accessionYP_550673 
Protein GI91789721 
COG category[S] Function unknown 
COG ID[COG4949] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.786087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATGA AAAAGGTCAT CATGCAACAG AACAACCACC TGCAGCAGCA TCCGCAAAGA 
ACGGCGCTGC ACAACGAAAT CCATGCCCGC CCGCCCGAGG CGATGACTGC TCCCCTGGCC
ATTTCACACG TGGTGATGGT GTGCGACGCT GCCCAGCGCG AGGCCAGCCG CGCCCATGTG
GCTGCCTTGC TGCGCGACCA CCATCTTCCC CAGCCTGACC TGGCGTCTAC CCACATCCGC
ATGGAAGTGG GGCCGTTTCG CATCCGCTGG GAGCTGCACA CCGAGTTTGT TTCCTGGACC
TTCACGCACC CGGTCGAGCT TGACGACCTC GACCAGCGCG AGCCCGTCGC CGCCATCGCC
GTCGTGCCGC AGGACTGGCT CGCCGGCTTG CCCGGCCAAT GCCTCGCGGC GCTGCACCTG
TGGGCCTTGC CCATGCACAG CCTGGGTGCT TCGACGCTGT CCCGGCGCGT GTTGCAGGAA
GACACCCTGA TCGGCTCCTC GGTGGCCGAC GGCAACGGCG AGGTCTACAC CGATCTGAGC
ATTCATGCCG ATGGCTTTTC CCGCATGGTG GTGCTGGCCG GCAGCCTGAC GCCGCGCCGC
CTGGGCCGGC TGGTGCAGCG CCTCATCGAG ATTGAAACCT ACCGCATGGC CGCGCTGCTG
GGTCTGCCGG CGGCGCGCGA GGCCTACAGC GTGCTGGCCT ATGCCGAGCG CGAGCTGGCC
GAACTGGCGC AGTCGATTCG CAGCGCCACG CCCAACGACG AACCCGTGCT GCTGGATCGC
CTGACCAAAC TGGCCGGCCA GGTGGAAAGC CAGCATGCGG CCACCCACTC GCGGTTTTCG
GCCAGTGCGG CGTATTTCGA GCTGGTGGAC AAGCGCATTG ACGACATTGC GGAGGCCCGG
CTGCCAGGCC TGCAGACCAT CCGTGAATTC ATGGACCGCC GCCTCACACC GGCGCGCAGT
ACCTGCGAGT GGGCCGCGCG CCGGCAGGAC GCCTTGTCGC AGCGGGTTTC ACGCATCAGC
AACCTGCTGC GCACCCGGGT CGAAATTGAC CAGCAGCAGA GCAGCCAGGC GCTGCTGGCC
ACCATGAACC AGCGCCAAGG CGTGCAGCTC AAGCTGCAGA CCGCGGTCGA GGGCCTGTCC
GTGGCCGCCA TCACCTATTA CACCGTCGGC CTCATTGCCT ACATGGCCAA GGGAGCGCAG
GCACTGGGCT GGCCGTGGAG CGGCGAAAGC ACGGCCGCAC TGGCCATACC GCTGGTGGCT
GCGGCTGTGT GGTGGTCCAT GCGAAAACTG CACCGGAAAA TTGTGGAACA GCACCCCGGG
GAAGCTTGA
 
Protein sequence
MRMKKVIMQQ NNHLQQHPQR TALHNEIHAR PPEAMTAPLA ISHVVMVCDA AQREASRAHV 
AALLRDHHLP QPDLASTHIR MEVGPFRIRW ELHTEFVSWT FTHPVELDDL DQREPVAAIA
VVPQDWLAGL PGQCLAALHL WALPMHSLGA STLSRRVLQE DTLIGSSVAD GNGEVYTDLS
IHADGFSRMV VLAGSLTPRR LGRLVQRLIE IETYRMAALL GLPAAREAYS VLAYAERELA
ELAQSIRSAT PNDEPVLLDR LTKLAGQVES QHAATHSRFS ASAAYFELVD KRIDDIAEAR
LPGLQTIREF MDRRLTPARS TCEWAARRQD ALSQRVSRIS NLLRTRVEID QQQSSQALLA
TMNQRQGVQL KLQTAVEGLS VAAITYYTVG LIAYMAKGAQ ALGWPWSGES TAALAIPLVA
AAVWWSMRKL HRKIVEQHPG EA