| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3876 |
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| Symbol | |
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| ID | 4013439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4067408 |
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| End bp | 4068202 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637943527 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_550670 |
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| Protein GI | 91789718 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTGG GTATTGCAGG CAAATGGGCG CTGGTCTGCG GCGCCAGCAA GGGTCTGGGC
TTCGGTTGCG CGCAAGCGCT GGTGCATGAA GGCGTGAACG TGCTCATCGT GGCGCGCGGC
GCCGCGGCGC TGGAGGCCGC TGCTGACAAA TTAATAGCTG ACAACACCCG CCACGACAGC
CCTGATGTGC AATTTGTTGC CGCAGACATC ACCACACCCG AAGGCCGCGC CGCGGTTTTT
GCGGTGCGCA AGGATTTCGA TATCGTGGTC ACCAATGCCG GTGGTCCGCC ACCGGGTGAC
TTCCGCGACT GGGACCGCGA CGCCTGGATC AAGGCCGTCG ATGCCAACAT GCTGACGCCC
ATCGAATTGA TCAAGGCCAC GGTGGACGGC ATGGCGGCGC GCGGTTTTGG CCGCATCGTC
AACATCACCT CCAGCGCCGT CAAGTCGCCC ATCGATATCC TCGGCTTGTC CAACGGCGCC
CGCAGCGGCC TGACCGGTTT TGTTGCCGGC GTGGCGCGCA GCAAGCTGGC TGGGCAGGGC
GTGACCATCA ACAACCTGCT GCCCGGCGCA TTTGACACGG ACCGGCTTCG GGGAACCATG
AGCGGCGCGG CGCAGAAAAC CGGCCAGCCG CTGGAAGCGA TCATGGACGC GCGTCGCAAG
AGCATTCCAG CCCAGCGTTT CGGAACGTCC GAAGAGTTTG GCGCCATCTG CGCATTTTTG
TGCAGCGCGC ATGCGGGCTA CATGACGGGC CAGAACGTGC TGGCCGACGG CGGCGCCTAT
CCGGGAACGT ACTGA
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| Protein sequence | MDLGIAGKWA LVCGASKGLG FGCAQALVHE GVNVLIVARG AAALEAAADK LIADNTRHDS
PDVQFVAADI TTPEGRAAVF AVRKDFDIVV TNAGGPPPGD FRDWDRDAWI KAVDANMLTP
IELIKATVDG MAARGFGRIV NITSSAVKSP IDILGLSNGA RSGLTGFVAG VARSKLAGQG
VTINNLLPGA FDTDRLRGTM SGAAQKTGQP LEAIMDARRK SIPAQRFGTS EEFGAICAFL
CSAHAGYMTG QNVLADGGAY PGTY
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