Gene Bpro_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3870 
Symbol 
ID4013472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4059926 
End bp4060873 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content63% 
IMG OID637943521 
Producthypothetical protein 
Protein accessionYP_550664 
Protein GI91789712 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0646118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAG GCCTGGCCAG CTCGGCCGGG GTGCAGGCCC AGGACTATCC CGGCAAGCCC 
ATCACCCTCG TGGTGCCTTT TTCAGCAGGC GGGGGCGTCG ACACGATCGC GCGCCTGCTT
GCCGAAAAGC TTCGTGTCTC GCTGAAGCAG TCCATCGTGG TGGACAACAA GGCCGGCGGC
AGCGGCATGA TTGGCGCGCA AGCCGTGGTG AGGGCTGTGC CCGACGGCTA CACGCTTTTG
TTGGGTTCGG CGGGTGAAAC CGCCATCAAT CCCTTTGTCT ACAAGGGCCG GATGCAGTAC
ACGCCGGCGA AAGACCTGGC GCCGATCACC CTGGTGACGC GCATTCCCAA TGTGCTGGTC
ACCAGCCCGA CCCTTCCGGT CAAGAACATG GAGGAGTTGA TAGCGCACGC CAAAAAGAAC
CCCGGCAAGC TGTCTTATTC GACCAGCGGT GTCGGCAACC CCCAGCACCT CAACGGCGAA
CTGCTGGAGG AGCTTGCCGG TATCCACATG GTTCACATTC CCTATCGGGG CGCGGCAGGT
CAATTGATTG ACGTCACCTC GGGCACGGTC GACATGACCT TTGTCAGCTA CACCGCGGCC
AAGGGCTTCA TCCAGAGCGG CAAGGTCAAG GCCATCGCCG TGACCTCGGC CAGGCGCGCC
AGTTTTGCGC CCGACATCCC TGCCATCGCC GAGTACAAGC CGCTGGCCAG GTACCAGCTG
GAAAACTGGT TCGGCCTGTT TGCGCCGGCC GGCACGCCAG ACGCCGTGCA GCAAAAGCTC
AATGCGGCGG TCACGCAGGC CTTGCGTGAT CCTGAATTGG CGAAAAAACT CCGGGAGCAG
GGCGGAGAGC CCGCTCCCAT GACGGCGCAG GAGTTTCGTG ACTTCATCAA GACCGAGGCC
GTGCAGTTCG AACGCATTGT CAGAACGGCC AACATCACGG CGGAATAG
 
Protein sequence
MAAGLASSAG VQAQDYPGKP ITLVVPFSAG GGVDTIARLL AEKLRVSLKQ SIVVDNKAGG 
SGMIGAQAVV RAVPDGYTLL LGSAGETAIN PFVYKGRMQY TPAKDLAPIT LVTRIPNVLV
TSPTLPVKNM EELIAHAKKN PGKLSYSTSG VGNPQHLNGE LLEELAGIHM VHIPYRGAAG
QLIDVTSGTV DMTFVSYTAA KGFIQSGKVK AIAVTSARRA SFAPDIPAIA EYKPLARYQL
ENWFGLFAPA GTPDAVQQKL NAAVTQALRD PELAKKLREQ GGEPAPMTAQ EFRDFIKTEA
VQFERIVRTA NITAE