| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3850 |
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| Symbol | lspA |
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| ID | 4013491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4042877 |
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| End bp | 4043371 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637943503 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_550646 |
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| Protein GI | 91789694 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.777675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGG CTTTCGGAAA AACCTCGGGT TCCATGCTGC CCTGGCTGGG GCTGGCACTG
ATTCTGCTAA TTGCCGACCA GTTCACCAAG GTGCTGATCC TGGGCTATTA CCGCCTGGGC
GATGCCACCT ATGTGACCAG TTTCTTCAAT GTGGTGCGGG TTCACAACAC CGGCGCCGCG
TTTTCCTTTC TGGCCTCAGC GTCGGGCTGG CAGCGCTGGT TTTTTACCGG TCTTGGTATT
GCCGCAGCGG TCTTCATTGT GTGGCTGCTC AGGTCTCATG CCGGGCAAAA GCTGTTTTCG
TTCGCGCTGG CCTGCATCCT GGGCGGTGCA GTCGGCAACG TGATCGACCG CACCCTGCAC
GGCTACGTGG TGGACTTTCT GGACTTCCAC TACGGCAACT GGCATTTTCC GGCCTTCAAC
ATCGCCGACA GCGCCATCAC CATTGGCGCG ATTTTTCTGG TGCTGGACGA GTTGCGGCGC
GTGCGCAGAA GTTGA
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| Protein sequence | MAKAFGKTSG SMLPWLGLAL ILLIADQFTK VLILGYYRLG DATYVTSFFN VVRVHNTGAA
FSFLASASGW QRWFFTGLGI AAAVFIVWLL RSHAGQKLFS FALACILGGA VGNVIDRTLH
GYVVDFLDFH YGNWHFPAFN IADSAITIGA IFLVLDELRR VRRS
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