| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3842 |
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| Symbol | |
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| ID | 4013483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4033206 |
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| End bp | 4034075 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637943495 |
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| Product | ABC transporter related |
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| Protein accession | YP_550638 |
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| Protein GI | 91789686 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000140209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.918006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGTCG CAGCAGTTCC TTCTTTGCTG GAAGTTGAAG ATCTCACTCT GACCTTCGGT
GGCGTCAAGG CGCTGCGCGG CGTCGGGTTC AGCGTGAAAG CCGACTCCAT CACGTCGGTG
ATTGGCCCGA ACGGTGCCGG CAAGACCTCT GTGTTCAACA CCATTTCTGG CTTTTATCGC
CCCAGCGCTG GCAGCATCCG CTTCGCAGGG CAGTCGCTTG ACGGCATGGC ACCGCCCAGG
CGGGCCGCGC TGGGTCTGGC ACGCAGCTTC CAGAACATCG CGCTGTTTCG CGGCATGACG
GTGCTCGACA ACATCAAGCT CGGCCGCCAT TGCCACCTCA AGACCGGGCC CTTGCAGGCG
CTGTTTTACA GCCCTGCCGC ACGGCGCGAA GAGCAGGAGC TTCGCCGCGA AATCGAGGAC
CGCATCATCG ACTTCCTGGA AATCGACCAC ATTCGCAAGG CGCCGGTATC AGCGCTGTCG
TATGGCCTGC AAAAGCGCGT CGAACTCGCG CGCGCCCTGG CCATGAAGCC CAAGCTGCTG
CTGCTCGATG AACCTGTCGC CGGCATGAAC CGCGAGGAAA CCGAAGACAT GGCGCGCTTT
ATCCTGGAGG TGCGGCGCGA GTGGGGCGTA ACGGTGCTGA TGGTCGAGCA CGACATGGGC
ATGGTGATGG ACCTGTCGGA CCATGTGGTG GTGCTGAACT TTGGCCAGGT AATTGCCGAC
GGCACGCCGG CCGAAGTGCA GGCCAACCCG GAGGTCATCA AGGCCTATCT GGGCTCGGGC
AACATCGAAG CGCTGCGCGC AAGATTCCAG CAAGCCGCGC AGGCCGGCAA GCGAGCAGGC
ATGGACAAAG ACGAGAGGCT TGCAGCATGA
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| Protein sequence | MKVAAVPSLL EVEDLTLTFG GVKALRGVGF SVKADSITSV IGPNGAGKTS VFNTISGFYR
PSAGSIRFAG QSLDGMAPPR RAALGLARSF QNIALFRGMT VLDNIKLGRH CHLKTGPLQA
LFYSPAARRE EQELRREIED RIIDFLEIDH IRKAPVSALS YGLQKRVELA RALAMKPKLL
LLDEPVAGMN REETEDMARF ILEVRREWGV TVLMVEHDMG MVMDLSDHVV VLNFGQVIAD
GTPAEVQANP EVIKAYLGSG NIEALRARFQ QAAQAGKRAG MDKDERLAA
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