Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3836 |
Symbol | |
ID | 4013477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4026557 |
End bp | 4027297 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637943489 |
Product | TetR family transcriptional regulator |
Protein accession | YP_550632 |
Protein GI | 91789680 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.487675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACTGCTC GAAAGCTCGT CTCCCCCTGG GCCCCCACTA CCGAACGCGA GAAGGTTCGC ACAGACAAGC GCGAGGCGGT GCTGCGCATG GCAGCACAGG TGTTCAACGA AAAAGGCTAC CAGGCTAGCA CGCTGGACGA GGTCGCCGAG CGGCTGCATG TCACCAAGCC GACGCTGTAC TACTACGTCA AGAGCAAGGA CGAAATTCTT TACGAATGCG TGCGTATTGG CCTCACGATG CTGCAGGACG CGATCACGGA GGTGGGTGCC TCCGGTGGCA GCGCGATGGA CAAGCTGGTG GCCGCCATGC ACAAATACAC CGAGATCGTG ACCATGGACT TTGGCATGTG CCTGATCCGC GTGGGCGAAG ACCCGCTGCC ACCGGAAAGC CAGCGCAAGC TAAGGCGCAT GAAGGCCGCA ATCGACAAAG AGTTCCGTGA ACTGATCCGG CTTGGCATCG AGGAAGGCTC CATCGCGCCC TGTGACCCCA AGATCGCCGC CTTCACGCTG GCAGGCGCGC TGAGCTGGAT TGGACGCTGG TACCGGCCCG ATGGGGCCTT GAGCCCAGAC GACATCGCGC AGCAATGCAT CGCTTTGCTG GCCAATGGCC TGTGCAGCGG CAAAGCCAAA CCCCTTGTGC GCCAGCGCCC TGCCGAACCG GCGCCGGCGG TACCCGTGTC CCTTGAACCT GCACCGGCCA CCGCAGCACG ACGCCGCGCC GGCCTGCGCA AAACCCCGTG A
|
Protein sequence | MTARKLVSPW APTTEREKVR TDKREAVLRM AAQVFNEKGY QASTLDEVAE RLHVTKPTLY YYVKSKDEIL YECVRIGLTM LQDAITEVGA SGGSAMDKLV AAMHKYTEIV TMDFGMCLIR VGEDPLPPES QRKLRRMKAA IDKEFRELIR LGIEEGSIAP CDPKIAAFTL AGALSWIGRW YRPDGALSPD DIAQQCIALL ANGLCSGKAK PLVRQRPAEP APAVPVSLEP APATAARRRA GLRKTP
|
| |