Gene Bpro_3820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3820 
Symbol 
ID4013500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4009362 
End bp4010276 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content62% 
IMG OID637943473 
Productamidohydrolase 2 
Protein accessionYP_550616 
Protein GI91789664 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA CACCATGCAT TGACACTCTG AGTGGGTCTC ATCCACCAAT TCGAAAGCAA 
CAGATGAAGT TTTCGTCGGG TTCGAACTCT CCCGGCATCA GGGTGCCTCC CGGCGCTATC
GACTGCCATC ACCATATTTA CGATGCGCGC TACCCTGCAG CGGAGAACGC CACCCTCAGG
CCGGCCGACG CCTTGATCGC CGATTACCGC GCGCTGCAAG CGCGCATTGG CACCACCCGC
AACGTGATCG TGCAACCCTC CACCTATGGC GTAGACAACC GCCTGCTGGT CGAGTCGCTC
GCCGCATTCG GGCTGGAGAA TGCGCGGGGT GTCGCTGTCG TCAACACCAG CGTGACCGAC
GGCGAGCTCA AGCAACTGCA CGACGCTGGC GTGCGCGGCA TTCGGTTCAA CCTGGCGCCT
CCCGGCACCA CCACGCTCGA CATGGTGCGC CCGCTCGCAC GACGCATTGC GCCCATGGGC
TGGCATATTC AGCTCAATGC ACCGTCGGCA GCGCTACTCG ATGCCAAATC AGTCTGGAGC
GATCTGCCCG TTCCCGTGGT GTTCGACCAC CTGGGCCGTG TGCCGCAACC GGGCGCTGCC
AACCATCCCA CCTTCGCCAT GATTCGTGGA CTGCTTCAGC AGGGCAAGGC CTATGTCAAA
CTTTCCGGGT TCTACAACGA GTCCAACGTC GGCTACCCGT CCTATTCAGA CAGCGTGCAA
GTGGCTACCC TCTATGCCAA GGAAGCGCCC GAACGTGTGG TCTGGGGAAG CGACTGGCCG
CACCCCACCG AAAAAGACAA GGGCTATCCA GACGACGCCC ATTTGATCGA TTTGCTGTCC
GAAGTCGTAC CCGACGAGGC GGCCCGCCAT CGCATTCTGG TGGACACCCC GGCAAGGCTG
TACCAGTTCG CATGA
 
Protein sequence
MTTTPCIDTL SGSHPPIRKQ QMKFSSGSNS PGIRVPPGAI DCHHHIYDAR YPAAENATLR 
PADALIADYR ALQARIGTTR NVIVQPSTYG VDNRLLVESL AAFGLENARG VAVVNTSVTD
GELKQLHDAG VRGIRFNLAP PGTTTLDMVR PLARRIAPMG WHIQLNAPSA ALLDAKSVWS
DLPVPVVFDH LGRVPQPGAA NHPTFAMIRG LLQQGKAYVK LSGFYNESNV GYPSYSDSVQ
VATLYAKEAP ERVVWGSDWP HPTEKDKGYP DDAHLIDLLS EVVPDEAARH RILVDTPARL
YQFA