Gene Bpro_3818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3818 
Symbol 
ID4013498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4007190 
End bp4008302 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content61% 
IMG OID637943471 
ProductABC transporter related 
Protein accessionYP_550614 
Protein GI91789662 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTACCG TCACTCTCAA AAATATCTGC AAAAGCTACC GCGGCACCCC CGTTCCATCC 
GTCAATGACG TCTCATTCAC TGTGAACGAC GGCGAATTCA TGGTCTTGCT CGGCCCCTCG
GGCTGCGGCA AATCGACCAC ATTGCGCATG ATTGCCGGCC TCGAATCGAT CACCAAAGGC
CAGCTGGATA TCGATGGCCG CGAAGTCAAC GAGGTCGCGG CCAAAGATCG CGATATCGCC
ATGGTGTTCC AGTCTTACGC GCTCTACCCC CACATGACCG TGGCTGAAAA CCTGGGTTTT
GGCCTGAAGC GCCGCAAGGT CGACAAGAAC GAAATCGCCG CAAGGGTCAA GAAAGCCTGC
GGCATTCTCG GCCTGGACGA GTTGCTGGAG CGCAAGCCTT TTGCGCTGTC AGGCGGCCAG
CGCCAGCGCG TGGCGCTGGG CCGTGCCATC GTGCGTGAGC CCAAGGTTTT CCTGTTTGAC
GAACCGCTGT CCAACCTGGA CGCGGCCTTG CGCGTCAACA CCCGCAACGA ACTGGTGCGC
TTGCACCAGC GCCTGAACGC AACCATGATT TACGTGACGC ACGACCAGGT CGAGGCGATG
ACCATGGGCC AGCGCATCTG CGTCATGAAC AAAGGACGCG TGGCGCAGAT CGGTCGGCCA
CTGGACGTGT ACCGGGCACC GGCCGATGCC TTCGTTGCAC GCTTCCTGGG CAACCCACCG
ATGAACATCG TGCGGGCCCA ATTGCTTGAA CACAATGGCC TGCGCCACGC GATGGTGGGC
GGGTGCGCAC TGCCCCTGGA GCGCTGGAAA GGCGTCTCAT TCAGCGCTGC TGACGAGGTA
TTGCTGGGGG TGCGGCCTGA AGAACTGTCG CTGACCACGA CGCCAGGCAG CGAGCAGGCA
TCACTGCGGG GCACAGTATC CGGAGTAGAA CCCCTGGGCG CAGAAACGCT TGTGATCGTC
GAACTGGAGC GCCAGGCGGG CGAGGTCACG GCGCGGCTGC ACCGCGAAAC ATCAGTCAGG
GTCGGTGACA CGGTAGGCCT CAGCTGCGCT TCGGAGGCCA TCTATCTGTT TGACCCGGTC
AGCGAGAAAG CCATTGTGGC AACGGATCAT TAA
 
Protein sequence
MATVTLKNIC KSYRGTPVPS VNDVSFTVND GEFMVLLGPS GCGKSTTLRM IAGLESITKG 
QLDIDGREVN EVAAKDRDIA MVFQSYALYP HMTVAENLGF GLKRRKVDKN EIAARVKKAC
GILGLDELLE RKPFALSGGQ RQRVALGRAI VREPKVFLFD EPLSNLDAAL RVNTRNELVR
LHQRLNATMI YVTHDQVEAM TMGQRICVMN KGRVAQIGRP LDVYRAPADA FVARFLGNPP
MNIVRAQLLE HNGLRHAMVG GCALPLERWK GVSFSAADEV LLGVRPEELS LTTTPGSEQA
SLRGTVSGVE PLGAETLVIV ELERQAGEVT ARLHRETSVR VGDTVGLSCA SEAIYLFDPV
SEKAIVATDH