Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3818 |
Symbol | |
ID | 4013498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4007190 |
End bp | 4008302 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637943471 |
Product | ABC transporter related |
Protein accession | YP_550614 |
Protein GI | 91789662 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCTACCG TCACTCTCAA AAATATCTGC AAAAGCTACC GCGGCACCCC CGTTCCATCC GTCAATGACG TCTCATTCAC TGTGAACGAC GGCGAATTCA TGGTCTTGCT CGGCCCCTCG GGCTGCGGCA AATCGACCAC ATTGCGCATG ATTGCCGGCC TCGAATCGAT CACCAAAGGC CAGCTGGATA TCGATGGCCG CGAAGTCAAC GAGGTCGCGG CCAAAGATCG CGATATCGCC ATGGTGTTCC AGTCTTACGC GCTCTACCCC CACATGACCG TGGCTGAAAA CCTGGGTTTT GGCCTGAAGC GCCGCAAGGT CGACAAGAAC GAAATCGCCG CAAGGGTCAA GAAAGCCTGC GGCATTCTCG GCCTGGACGA GTTGCTGGAG CGCAAGCCTT TTGCGCTGTC AGGCGGCCAG CGCCAGCGCG TGGCGCTGGG CCGTGCCATC GTGCGTGAGC CCAAGGTTTT CCTGTTTGAC GAACCGCTGT CCAACCTGGA CGCGGCCTTG CGCGTCAACA CCCGCAACGA ACTGGTGCGC TTGCACCAGC GCCTGAACGC AACCATGATT TACGTGACGC ACGACCAGGT CGAGGCGATG ACCATGGGCC AGCGCATCTG CGTCATGAAC AAAGGACGCG TGGCGCAGAT CGGTCGGCCA CTGGACGTGT ACCGGGCACC GGCCGATGCC TTCGTTGCAC GCTTCCTGGG CAACCCACCG ATGAACATCG TGCGGGCCCA ATTGCTTGAA CACAATGGCC TGCGCCACGC GATGGTGGGC GGGTGCGCAC TGCCCCTGGA GCGCTGGAAA GGCGTCTCAT TCAGCGCTGC TGACGAGGTA TTGCTGGGGG TGCGGCCTGA AGAACTGTCG CTGACCACGA CGCCAGGCAG CGAGCAGGCA TCACTGCGGG GCACAGTATC CGGAGTAGAA CCCCTGGGCG CAGAAACGCT TGTGATCGTC GAACTGGAGC GCCAGGCGGG CGAGGTCACG GCGCGGCTGC ACCGCGAAAC ATCAGTCAGG GTCGGTGACA CGGTAGGCCT CAGCTGCGCT TCGGAGGCCA TCTATCTGTT TGACCCGGTC AGCGAGAAAG CCATTGTGGC AACGGATCAT TAA
|
Protein sequence | MATVTLKNIC KSYRGTPVPS VNDVSFTVND GEFMVLLGPS GCGKSTTLRM IAGLESITKG QLDIDGREVN EVAAKDRDIA MVFQSYALYP HMTVAENLGF GLKRRKVDKN EIAARVKKAC GILGLDELLE RKPFALSGGQ RQRVALGRAI VREPKVFLFD EPLSNLDAAL RVNTRNELVR LHQRLNATMI YVTHDQVEAM TMGQRICVMN KGRVAQIGRP LDVYRAPADA FVARFLGNPP MNIVRAQLLE HNGLRHAMVG GCALPLERWK GVSFSAADEV LLGVRPEELS LTTTPGSEQA SLRGTVSGVE PLGAETLVIV ELERQAGEVT ARLHRETSVR VGDTVGLSCA SEAIYLFDPV SEKAIVATDH
|
| |