| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3808 |
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| Symbol | prfC |
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| ID | 4013527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3995559 |
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| End bp | 3997175 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637943461 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_550604 |
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| Protein GI | 91789652 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAA CCACCGAAAT CGCAAAACAG GTCAAGCGCC GCCGCACGTT TGCCATCATT
TCCCACCCTG ACGCCGGCAA GACCACGCTG ACCGAGAAGC TGCTGCTGTT TTCGGGTGCG
ATCCAGATCG CCGGCAGCGT CAAGGCCCGC AAGGCCGCGC GCCATGCCAC GTCGGACTGG
ATGGAGATTG AAAAGCAGCG CGGCATCTCG GTGGCCAGCT CGGTCATGCA GATGGAATAC
CGCGACTGCG TGATCAACCT GCTCGACACC CCCGGCCACC AGGACTTTTC GGAAGATACC
TACCGCGTGT TGACGGCAGT CGATGCCGCG CTGATGGTGA TTGACGCGGC CAACGGCGTC
GAGCCGCAGA CGCGCCGCCT GCTGCAGGTC TGCCGCGCAC GCAACACGCC CATCCTCACG
TTCGTCAACA AGATGGACCG CGAGGTGCAG GACCCGATGA GCGTGATGGA CGAGATCGAG
CGTGAACTTG GCATGGCGGT GGTGCCCTTC ACCTGGCCGG TGGGCATGGG CAAACTCTTT
CACGGCGTTT ATGACCGGCG TGAAGACCGC ATGCGCGTCT TCAGCCCGGG TGAAGAAAAA
GCGGGCGGCG ACGATGAAAT CCTGGCCGGC CTGGACAACG CCGAAGCCGC GAAACGCTTT
GGCGCCGAAT ACAAGCAGGC GCAGGAAGAG ATTGAGCTGG TTGCCGGCGC CTCGCACGAA
TTTGACCGCG CCCAATTCCT CAGCGGCAAA CAGACGCCCA TGTTCTTTGG CTCGGCCATC
AACAACTTTG GTGTGCAGGA GGTGCTGGAC GCGCTGGTGG ACCTGGCCCC CGCCCCAGCC
GAGCGCGAAG CCATCCAGCG CGTGGTGCAG CCTGACGAAA AGAAATTCTC CGGCGTGGTG
TTCAAGATCC AGGCCAATAT GGACCCGGCA CACCGCGACC GCATTGCGTT TTTGCGCGTG
GCCAGCGGCG AGTTCACGCG CGGCATGCGC CTGAAGGTGG TGCGCAGCGG CAAGGAGTTG
CGGCCCAACA CGGTGGTGAG CTTCATGAGC CAGCGCAGGG AATTACTGGA TACTGCGTTC
GCCGGTGACA TCATCGGTAT TCCCAACCAC GGCGTGCTGC AGTTGGGCGA CACGCTCACC
GAAGGCGAAG CGCTGCAATT CACCGGCCTG CCCTTCTTCG CGCCCGAGAT GTTCCGCTCC
GTTGAAGTGG CCGATCCGCT GCGCAGCAAG CAGCTGCGTG CCGGCCTCAC GCAGCTGGGT
GAAGAAGGTG CGATCCAGGT GTTCCGGCCC ATTGCCGGCT CCGTGCTGCT GCTGGGCGCC
GTCGGCCAGC TGCAGTTTGA AGTGGTGGCA CACCGCCTGG AGCACGAGTA CGGCGTCAAG
GCCCGCATCA TGGGCAGCAA CTTCAACCTG GCCCGCTGGG TCACCAGCGA CGACGCCAAT
GAGTTGAAAA AATTCATGGA TGCCAACGCG CACCGCGTCG CGCTCGATGC GGTCGATGCG
CCCACGCTGC TGGTGGACCA CAGCGCCACC TTGCGCGCGG TCGAGCAGCA ATGGCCCAAG
ATCCGGTTCC ATGCGCTGCG CGAGCATGCC GGGCTGGTGT TTCAGTCAAA GATGTAA
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| Protein sequence | MSETTEIAKQ VKRRRTFAII SHPDAGKTTL TEKLLLFSGA IQIAGSVKAR KAARHATSDW
MEIEKQRGIS VASSVMQMEY RDCVINLLDT PGHQDFSEDT YRVLTAVDAA LMVIDAANGV
EPQTRRLLQV CRARNTPILT FVNKMDREVQ DPMSVMDEIE RELGMAVVPF TWPVGMGKLF
HGVYDRREDR MRVFSPGEEK AGGDDEILAG LDNAEAAKRF GAEYKQAQEE IELVAGASHE
FDRAQFLSGK QTPMFFGSAI NNFGVQEVLD ALVDLAPAPA EREAIQRVVQ PDEKKFSGVV
FKIQANMDPA HRDRIAFLRV ASGEFTRGMR LKVVRSGKEL RPNTVVSFMS QRRELLDTAF
AGDIIGIPNH GVLQLGDTLT EGEALQFTGL PFFAPEMFRS VEVADPLRSK QLRAGLTQLG
EEGAIQVFRP IAGSVLLLGA VGQLQFEVVA HRLEHEYGVK ARIMGSNFNL ARWVTSDDAN
ELKKFMDANA HRVALDAVDA PTLLVDHSAT LRAVEQQWPK IRFHALREHA GLVFQSKM
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