| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3796 |
|---|
| Symbol | |
|---|
| ID | 4013554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3981978 |
|---|
| End bp | 3982907 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637943449 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_550592 |
|---|
| Protein GI | 91789640 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTAT TGCTTCAGCA GATCATCAAT GGTCTGGTAC TGGGTAGCAT GTATGCCCTG
ATCGCCCTGG GCTACACCAT GGTCTACGGC ATCATCAACC TGATCAATTT TGCGCATGGC
GAGGTCTTGA TGGTGGGTGC GCTGACCAGC TGGACCATCA TCGGCCTGAT GCAGGAGGCC
ATGCCGGGCA CACCGGGCTG GCTGATCTTG CTGATTTCGC TGCTGATCGC CTTCGTGGTG
TGCGGTGCGC TGAATTTCGC GATTGAAAAA GTCGCCTACC GGCCGCTGCG CAATTCGCCC
AAGCTGGCCC CGCTGATCAC CGCCATTGGC ATGTCGCTGC TGCTGCAGAC GCTGGCCATG
ATGATCTGGA AGCCCAACTA CAAACCTTAC CCAACCCTCT TGCCGACCGA GCCCTTCCAG
GTGGGCGGCG CCGTGATCAC CGTGACCCAG CTGTTCATTC TGGGTGCCAC GGCGGTTTCT
CTCTCAGTGC TGATGTGGCT GGTGCATTAC ACCCGGCTGG GCCGTGCCAT GCGCGCTACC
GCCGAGAACC CGCGCGTGGC GGCGCTGATG GGCGTGCGGC CCGATACCGT GATTTCCGCC
ACCTTCATCA TCGGTGCCAT TCTGGCGGCG CTGGCCGGCG TGATGTACGC CTCCAATTAC
GGCACGGTGC AGCACACCAT GGGCTTTTTG CCCGGTCTCA AGGCCTTTAC GGCAGCCGTG
TTTGGCGGCA TCGGCAACCT GGGCGGCGCG GTGCTGGGCG GCATCCTGCT GGGCCTGATT
GAATCCATCG GTGCGGGCTA CATCGGCCCG CTGACGGGTG GCGTGCTGGG CAGCCAGTAC
TCCGATATTT TTGCCTTTAT CGTGCTGATT TTTGTGCTCA CGCTGCGCCC ATCCGGCCTG
CTGGGTGAAC GTGTGGCTGA CCGGGCCTGA
|
|---|
| Protein sequence | MEVLLQQIIN GLVLGSMYAL IALGYTMVYG IINLINFAHG EVLMVGALTS WTIIGLMQEA
MPGTPGWLIL LISLLIAFVV CGALNFAIEK VAYRPLRNSP KLAPLITAIG MSLLLQTLAM
MIWKPNYKPY PTLLPTEPFQ VGGAVITVTQ LFILGATAVS LSVLMWLVHY TRLGRAMRAT
AENPRVAALM GVRPDTVISA TFIIGAILAA LAGVMYASNY GTVQHTMGFL PGLKAFTAAV
FGGIGNLGGA VLGGILLGLI ESIGAGYIGP LTGGVLGSQY SDIFAFIVLI FVLTLRPSGL
LGERVADRA
|
|---|
| |