Gene Bpro_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3793 
Symbol 
ID4013551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3979355 
End bp3980071 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content62% 
IMG OID637943446 
ProductABC transporter related 
Protein accessionYP_550589 
Protein GI91789637 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACA CACTTCTTAA AGTGACCGGG CTCAAGGTGG CTTACGGCGG CATCCAGGCG 
GTCAAGGGCG TTGACTTTGA AGTCAATGAG GGCGAACTCG TCACCCTGAT CGGCTCCAAC
GGCGCCGGCA AAACCACCAC CATGAAAGCC ATCACCGGCA CCTTGCCGAT GCTCGATGGT
GACATTCAGT ACCTGGGCAA AAGCATCAAG GGCCGGGGCG CCTGGGACCT GGTGAAAGAA
GGCCTGGCCA TGGTGCCCGA GGGCCGCGGC GTGTTCGCCC GCATGACCAT CACCGAAAAC
CTGCAGATGG GCGCCTATAT CCGCAGCGAC AAGGCAGGCA TCGCCGAAGA CATCGAAAAG
ATGTTTGCGC TGTTCCCGCG TCTGCGTGAG CGTAAAGACC AGTTGGCCGG CACCCTGTCC
GGTGGCGAGC AGCAGATGCT GGCCATGGGC CGCGCGCTGA TGAGCCGGCC CAAGGTGCTG
CTGCTCGACG AGCCATCGAT GGGCTTGTCG CCCATCATGG TGGACAAGAT TTTCGAAGTG
GTGCGCGACG TGTCGGCGCG CGGCGTGACC ATCCTGCTCG TGGAGCAAAA TGCCAGCCGT
GCGCTGGGCA TTGCCAACCG CGGCTATGTG ATGGAGTCGG GCAACGTCAC CATGAACGGC
GATGCCAAGC AACTGCTCAG CGATCCGCGG GTTCGGGCGG CCTACCTGGG CGAGTGA
 
Protein sequence
MANTLLKVTG LKVAYGGIQA VKGVDFEVNE GELVTLIGSN GAGKTTTMKA ITGTLPMLDG 
DIQYLGKSIK GRGAWDLVKE GLAMVPEGRG VFARMTITEN LQMGAYIRSD KAGIAEDIEK
MFALFPRLRE RKDQLAGTLS GGEQQMLAMG RALMSRPKVL LLDEPSMGLS PIMVDKIFEV
VRDVSARGVT ILLVEQNASR ALGIANRGYV MESGNVTMNG DAKQLLSDPR VRAAYLGE