| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3728 |
|---|
| Symbol | |
|---|
| ID | 4013602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3935073 |
|---|
| End bp | 3935897 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637943382 |
|---|
| Product | DNA adenine methylase |
|---|
| Protein accession | YP_550525 |
|---|
| Protein GI | 91789573 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0338] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00571] DNA adenine methylase (dam) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAC GGGAGCCCCG AGCGCTCATT AACAATGCAA TGCATATTCA GGCCTCGCCC
TTGGTGCCGT GGGTAGGTGG CAAGCGTCGC CTGGCGCAAT TCATCCTGCC CATGTTTCCT
GACCACAGCT GCTACGTCGA GCCTTTCTGC GGAGCCGCAG CGCTGTTCTT CATGAAGCCC
CCGGTCAGGG TCGAGGTGCT GAATGATGTC AACAGCGACC TGGTGCGGCT TTACCGGGTA
GTGACCCACC ATCTTGACGA GTTCATCCGG CAATTCAGGT GGGCGCTCAA CAGCCGCGAG
TTGTTCAATT GGCTGCAGGA GACGCCACCG GCCACGCTGA CCGATATACA GAGAGCTGCG
CGGTTCTACT ACCTGCAAAA GTGCGCTTTC GGTGGCAAGG TGAAGGGCCA GAGCTTCGGC
ACCGCCACCA CGGCCAAGGC CAGCATCAAC CTGCTCAGAA TGGAAGAGGA TTTAAGCGCC
GTCCACCTGC GCCTACACCA GGTGTTTATT GAGCACCTGG ACTGGGCCAA ATGCGTTGAA
AAATACGACC GGCCCCACAG CTTGTTTTAC CTCGATCCGC CCTACTGGGG AACCGAGGGT
TACGGTGTCG ATTTCGGCCT TGAGCAGTAC GACCGGATGG CCGAGCTGCT GCGCACCATG
AAGGGCAAGG CGGCCGTCAG CGTGAACGAC ATCCCGGAGA TGCGCCAGGC CTTCAAGGGC
CTGTCCATCA AACGGTTGGT CACCAGCTAC ACCCTGGGCC GATCTGGGGA GGGCAGGCAG
GCCAAGGGCG AGCTGCTGAT TACCAATTTC AAGCCTGGGG GATGA
|
|---|
| Protein sequence | MTKREPRALI NNAMHIQASP LVPWVGGKRR LAQFILPMFP DHSCYVEPFC GAAALFFMKP
PVRVEVLNDV NSDLVRLYRV VTHHLDEFIR QFRWALNSRE LFNWLQETPP ATLTDIQRAA
RFYYLQKCAF GGKVKGQSFG TATTAKASIN LLRMEEDLSA VHLRLHQVFI EHLDWAKCVE
KYDRPHSLFY LDPPYWGTEG YGVDFGLEQY DRMAELLRTM KGKAAVSVND IPEMRQAFKG
LSIKRLVTSY TLGRSGEGRQ AKGELLITNF KPGG
|
|---|
| |