| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3720 |
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| Symbol | |
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| ID | 4013631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3926110 |
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| End bp | 3927174 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637943374 |
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| Product | PDZ/DHR/GLGF |
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| Protein accession | YP_550518 |
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| Protein GI | 91789566 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.285771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.385221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACTC TACTTGTCCG GCCGCTTCTT GCCTTGTCCC TTTCTTTAGC GCTGGCCCCG
GGAGCGCTCA CTGCGTCATT CGCTGCGAGC CCACTGCCGC CGCCCACGGT TCAGGCTGTG
ATCGATGCCC TGAGCAAGGC CAACGCAGCG GTTGTCGGCA TCCAGGTGAC CGCCGTTCCG
GACGCCCGGT CGATACAGAC ACTGGGACGG GAGCGCACCG GCTCGGGCGT GGTGATAGGC
GCCGATGGCC TGGTCCTGAC AATCGGCTAC CTGATGCTCG AAGCCCAGCG GATCGAGGTT
GTCACCCAGG ACAACAAAAG CCTGCCGGCC ACCGCTGTGG CCTACGACAT CGCCACAGGT
TTTGGCCTGG TCAGGCCGTT GCTGCCCTTG CGCGGCGTGG CACCCGTGAC ACTGGGAAAT
TCCCAGGATG TCACGCCCGG TGAAGCACTG ATGGCCGCCA CCGGGGCAAC CGTCGACGGC
GAAGACGGTG ACGTGAGCAT GACGCAGCTG GTCAGCAAGC GCGCTTTTTC GGGCAACTGG
GAGTACCACA TCGACACCGC GCTGTTCACC AGCCCACCCG TCACTGCAGG CGGGGGCAAC
CACAGCGGCG CGCCGCTGTT CAACCAGATG GGTGAACTGG TCGGCATCGG CTCGCTGCTG
GTGATGGACG CCAGCGGCGA AAACCGCCGC CTGCCCGGCA ACATGTTCGT GCCCATCGAT
CTGCTCAAGC CCATCCTGGC TGAAATGCAG CAGTCGGGCA GCACCCGTCA AAGCCACCGG
CCGTGGCTGG GATTGACGTC GAATGACCAC GAGGGGCGCA TTCAGATCAT GCGTGTCAGC
GCCGACAGCC CGGCAGAGAA TGCTGGCCTG CAGCCGGGTG TGGTGGTCCT GGCCGTGGAC
GGCACCGAAG TCACGACGCT GGAGGGCTTC TACAAGAAAC TGTGGGAACG CGCGGCGCCC
GACGCGCCGG TGACGCTCAC GGTGCGCCAG GGCGATGAAG TCAAAACAAT TGTCATCAAC
CCCGAGGACC GGATGCTGAC GCTGAAGAAA CCCCCGGGTA TCTGA
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| Protein sequence | MRTLLVRPLL ALSLSLALAP GALTASFAAS PLPPPTVQAV IDALSKANAA VVGIQVTAVP
DARSIQTLGR ERTGSGVVIG ADGLVLTIGY LMLEAQRIEV VTQDNKSLPA TAVAYDIATG
FGLVRPLLPL RGVAPVTLGN SQDVTPGEAL MAATGATVDG EDGDVSMTQL VSKRAFSGNW
EYHIDTALFT SPPVTAGGGN HSGAPLFNQM GELVGIGSLL VMDASGENRR LPGNMFVPID
LLKPILAEMQ QSGSTRQSHR PWLGLTSNDH EGRIQIMRVS ADSPAENAGL QPGVVVLAVD
GTEVTTLEGF YKKLWERAAP DAPVTLTVRQ GDEVKTIVIN PEDRMLTLKK PPGI
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