| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3660 |
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| Symbol | |
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| ID | 4013689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3858352 |
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| End bp | 3861477 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637943318 |
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| Product | ribonuclease E |
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| Protein accession | YP_550462 |
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| Protein GI | 91789510 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGA TGCTGGTAAA CGCCACACAG GCTGAAGAAC GCCGCCTGGC GATCGTCGAT
GGACAAAAAC TCCTCGACTA CGAAATTGAA ATTGAAGGGC GCGAGCAGCG CAAGGGCAAC
ATCTACAAGG CCGTCGTCAC CCGCGTCGAG CCTTCGCTGG AAGCCTGCTT TGTTGACTAC
GGTGAAGACC GCCACGGCTT CCTGCCGTTC AAGGAAATCT CCAAGCAATA CTTTGCGCAG
GGCGTGCCGG TCAGCCAGGC ACGCATCAAC GATGTGATCC GCGAAGGCCA GGAACTGCTG
GTCCAGGTCG AAAAGGAAGA GCGCGGCAAC AAGGGCGCAG CCCTGACCAC GTTCGTGTCG
CTCGCAGGCC GCTATGTGGT CCTGATGCCC AACAACCCGC GCGGCGGTGG CGTGAGCCGC
CGCATCGAGG GCGACGACCG GGCCGAGCTC AAGGAAGCGA TGGACCAGCT CGAGTACCCC
AATGGCATGA GCATCATCGC GCGCACCGCC GGCATCGGCC GCAGCGCACC CGAGCTGCAG
TGGGACCTGA ACTATCTGCT CAAGCTCTGG ACGGCCATTG ACGGCGCCGG CAAGGGCGGC
AAGGGCGCTT TCCTGATTTA CCAGGAATCC AGCCTGGTGA TCCGCGCCAT CCGCGACTAC
TTCAACAGCG ACATCGGCGA CATTCTGTTC GACACCGACG ACGTCTACGA GCAGGCCCGC
CAGTTCATGG CCCACGTGAT GCCCGAGCAT GAGCACCGCG TCAAGCGCTA CCGCGATGAC
GCGCCGCTGT TCTCGCGCTT CCAGATCGAG CACCAGATCG AGTCGGCCTA CGCCCGCACC
GTGCAGCTGC CATCCGGCGG CGCCATCGTG ATCGACCACA CCGAAGCGCT GGTTTCGGTC
GACGTCAACT CGGCCCGCGC CATCAAGGGC GGCGACATCG AAGAAACCGC CACGCGCACC
AACCTGGAAG CCGCCGATGA AGTCGCACGC CAGATGCGCC TGCGCGACCT GGGTGGCCTG
ATCGTCATCG ACTTCATCGA CATGGAAGAG TCGCGCAACC GCCGCGATGT GGAAAACCGC
CTGCGCGATG CGCTGCGGCA AGACCGCGCA CGCGTGCAGT TCGGCACCAT CAGCAAATTC
GGCCTGATGG AAATGAGCCG TCAACGGCTG CGCCCTGCCC TGTCGGAAGG CGCGTCGATT
CCCTGCCCGC GTTGCGGCGG CTCCGGCCAT ATCCGCGACA CGGAAAGCTC GGCGCTGCAG
ATCCTGCGCG TCATCCAGGA AGAGTCCCTG AAAGACAGCA CGGCTTCGGT GCTGTGCCAG
GTGCCGGTGG ATGTGGCGTC TTTCCTGCTC AACGAAAAAC GCTCCGAAAT CGGCAAGATC
GAGCTCAAGC AGCGCATCAA TGTGCTGCTG GTTCCCAACA AGACACTGGA GACGCCGAAC
TACCGCCTGG AGCGCCTCAA GCACGACGAT CCGCGCCTGG ACAATATCGA AGCGAGCTAC
AAGCTGGCTG ACGAGGTGGA AGACCCGACG ACGGTGACCC GCCGCAGCCA GGAAAAGCAC
AACAAGCAGG AACCCGTGAT CAAGGGCGTG CTGCCCGATG CGCCGGCTCC GATTGCCCCG
CCCAAGCCCG AACCGGTAGC CCCTGCGGCC AAAGCGGCAC CGCGCCCAGC GCCTGCAGCG
CCAGCCCACG TGGCAGCCGA AAAAGGCTTC TTTGGCTGGA TCAAGAGCCT GTTCGGCGGC
ACCGAAGCGC CGGCTGCAGC GCCCGCCGCT GAAGTGAAGA AAGACGAGCG CAGCGGCGAG
GCACGGCGCG AAGGACGTGA TGGACGCGGC GAGCGCGGTG AACGTTCAGA GCGCGGAGGC
CGGGACGGCC GCCGTGGTGG CCGCAGCCGC GGTGAAGGTC GTGGGGAAGG CCGCGGCGAA
GCCCGCCCGG AGAGCCGACC CGAAGGTCGT GGCGACCGGG GTGAGGGCCG CGGCGGCGAA
CGCCGTGAAC GCAGTCCCGA AGCACGCGGC GAAGGCGCAC GCCAGGAACG TCCCGCCGGG
GAAGCACGCG CTGAAGCACG CCCGGAAAAT CGCGGCGAAG GCCAGCCCCG CAGCGAAGGT
CGCACCGACG GCCGTGGCGA GGGCCGTGGT GACCGCAGCC GCCGCGAGCG CGGCGAACGC
GGCGACCGCA TCCCACGCGA TGCGGCAGAG CAGGATCTCG CATTGGCCAA CCAGGCCGCC
ATGGCCGCAG CCATGGGTGG CGATGCTGCC GTGCAGGGAC AGGACAGGCC CGCCCAGGAA
GCCGGCCGTG ACGGCGATCG CCAGCAGGGC GGACGCGAAG GACGGGGCGA AGGTCGCCGC
GAGCGCGGTG AACGGGGTGG AGAGCGCGGT GGCCGCCGCA ATGATCGCCG CGGCGAACGC
ACCGAGGGCC AGGGCCCGGC CGCCGACACC GCTGGCAATA CCGTGAGCGG TGAAGCCGCG
CCTATGGCTG CAGTTGCACT CGACGAGACA GGCCAGACCC TGACGCAAAA CCAGAACGGC
CAGGGCGATA GCCCGGTCGA CGAGCAGCGC CAGCCCCGCG AACGCCGCAG CCGTGACCGC
TACGGCCGCG ACCGGCGCGA GCGTGGCGAG GAGCGTGCTG AAAGCGGCGA GCGCAGCGAA
CAGGCCGCCG AGAGCGCCAC CGCACCCGCC AGTTCAGAGC AAAATCAGGC CCCTGCCCTG
GAAGAGCGTG CACCAGTTGC TACTGAATTT GTAGCATCTT CTGTGGCTCC AGTGGCTGCT
TCGGCTCCGG CTCCTGCCTA CACGGCGCCC ATGGCCGCGG CCGCACCCGT GGCAACGCCC
GTGCCTGTGC CTGTGCCTGT GCCTGCACCC GCAGCAGCCA GCATCATGCT GCCCAAGGTC
CAGGCCTACG CCCTGCCCCT GCAGGACCTG GCGCAGGTGG CCGAGTCTTC AGGCCTGCAA
TGGGTCAACT CCGACGCGGC CAAGATTGCC GAAGCGCAAG CCGCCATCGC CGCTGAAATC
AAACCGGTGC ATGTGCCGCG CGAGCGCCCG CCGCTGGCGG TGTCTGATGA AGGTCCGCTG
GTGCTGGTGG AGACCCGCCG CGATCTGGGC TCAATGGCGC AGCCCTTTGA GCAACCATCC
GCCTGA
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| Protein sequence | MKRMLVNATQ AEERRLAIVD GQKLLDYEIE IEGREQRKGN IYKAVVTRVE PSLEACFVDY
GEDRHGFLPF KEISKQYFAQ GVPVSQARIN DVIREGQELL VQVEKEERGN KGAALTTFVS
LAGRYVVLMP NNPRGGGVSR RIEGDDRAEL KEAMDQLEYP NGMSIIARTA GIGRSAPELQ
WDLNYLLKLW TAIDGAGKGG KGAFLIYQES SLVIRAIRDY FNSDIGDILF DTDDVYEQAR
QFMAHVMPEH EHRVKRYRDD APLFSRFQIE HQIESAYART VQLPSGGAIV IDHTEALVSV
DVNSARAIKG GDIEETATRT NLEAADEVAR QMRLRDLGGL IVIDFIDMEE SRNRRDVENR
LRDALRQDRA RVQFGTISKF GLMEMSRQRL RPALSEGASI PCPRCGGSGH IRDTESSALQ
ILRVIQEESL KDSTASVLCQ VPVDVASFLL NEKRSEIGKI ELKQRINVLL VPNKTLETPN
YRLERLKHDD PRLDNIEASY KLADEVEDPT TVTRRSQEKH NKQEPVIKGV LPDAPAPIAP
PKPEPVAPAA KAAPRPAPAA PAHVAAEKGF FGWIKSLFGG TEAPAAAPAA EVKKDERSGE
ARREGRDGRG ERGERSERGG RDGRRGGRSR GEGRGEGRGE ARPESRPEGR GDRGEGRGGE
RRERSPEARG EGARQERPAG EARAEARPEN RGEGQPRSEG RTDGRGEGRG DRSRRERGER
GDRIPRDAAE QDLALANQAA MAAAMGGDAA VQGQDRPAQE AGRDGDRQQG GREGRGEGRR
ERGERGGERG GRRNDRRGER TEGQGPAADT AGNTVSGEAA PMAAVALDET GQTLTQNQNG
QGDSPVDEQR QPRERRSRDR YGRDRRERGE ERAESGERSE QAAESATAPA SSEQNQAPAL
EERAPVATEF VASSVAPVAA SAPAPAYTAP MAAAAPVATP VPVPVPVPAP AAASIMLPKV
QAYALPLQDL AQVAESSGLQ WVNSDAAKIA EAQAAIAAEI KPVHVPRERP PLAVSDEGPL
VLVETRRDLG SMAQPFEQPS A
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