| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3659 |
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| Symbol | |
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| ID | 4013688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3856525 |
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| End bp | 3857661 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637943317 |
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| Product | pseudouridine synthase, RluD |
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| Protein accession | YP_550461 |
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| Protein GI | 91789509 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCCG CCTCCCAACC CAGACCCCCG GCTCCGTCTC GCCCTCCTGT TCAAGAGGCG
GCAGCGCCTG CGCCACCGCA GGCCACGCTG GTCACGGTCG ACGAGGATTA CGCCGGCCAG
CGGCTCGACA ACTTCCTGAT CCGCCACCTC AAGGGTGTGC CCAAGACCCA CGTCTACCGC
ATCATCCGCA GTGGCGAGGT AAGAATCAAC AAGGGCAGGG CACAGGCCGA TACCCGCCTT
GAAGCCGGCG ATATCGTCCG CCTGCCGCCG GTGCGCACCT CGGAACGGGC CGACCAGAAG
GCCCAGGCCA TGGCCGAGGA GGTGGCGCGC CACGGCGCCA GCTCCACCGT CGGCGGGTAT
GCGCCGTCGC GGGAATTTCC GGTCCTGTTC GAAGACGACT TCCTGCTGGC CATCGACAAA
CCGGCCGGCG TGGCGGTGCA TGGCGGCAGC GGCGTGAGCT TCGGGGTGAT TGAGCAGTTG
CGCATGGCCC GGCCCCAGGC GGATTTCCTG GAGCTGGTGC ACCGGCTGGA CCGGGAAACC
AGCGGCATCC TGCTGATCGC CAAGCGCCGA ATGGCCCTGA AACTGCTGCA GGAACAGTTC
CGCGAGCGCG AAACCGACAA GGTTTACCTG GCGCTGGTGA GCGGCAACTG GCCTGCCAAT
CACCGCGTGA TCGACAAGGC GCTGCACAAA TACCTGTTGC CCGGCGGCGC TGGTGAAGGC
GAACGGCGCG TCAAGGTGGT GCCCAATGAC CATCCCGACG GCATGCGCTC GGTCACGCTG
GTCAAGGTCA AGTCCGCCTT TGCGGCCCTT CCCGCGGCCC CGGGCACCCC GTTTACCCTG
CTCGAAGTCA CCATCAAGAC CGGCCGCACG CACCAGATTC GTGTGCACCT GGCCAACGAG
GGCCACCCGA TTGCGGGGGA TGATAAATAC GGCGACTTTG AGCTGAACAA GTCCCTGCAG
AAGTCCGTTG CCGGGGGCGC TCCCCTGAAA CGCATGTTTC TGCATGCCTG GAGCCTGAAA
TTCAACCATC CCAAGACGCG CAAAACCATT CATCTGGAAA CGCCCTTGCC CGACGAGCTG
CAGCAGTTTC TGTCGGTCCG GCCCCAGGGC AGCGCAGGAC CCGCCGCACA ACCGTGA
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| Protein sequence | MVAASQPRPP APSRPPVQEA AAPAPPQATL VTVDEDYAGQ RLDNFLIRHL KGVPKTHVYR
IIRSGEVRIN KGRAQADTRL EAGDIVRLPP VRTSERADQK AQAMAEEVAR HGASSTVGGY
APSREFPVLF EDDFLLAIDK PAGVAVHGGS GVSFGVIEQL RMARPQADFL ELVHRLDRET
SGILLIAKRR MALKLLQEQF RERETDKVYL ALVSGNWPAN HRVIDKALHK YLLPGGAGEG
ERRVKVVPND HPDGMRSVTL VKVKSAFAAL PAAPGTPFTL LEVTIKTGRT HQIRVHLANE
GHPIAGDDKY GDFELNKSLQ KSVAGGAPLK RMFLHAWSLK FNHPKTRKTI HLETPLPDEL
QQFLSVRPQG SAGPAAQP
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