| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3653 |
|---|
| Symbol | |
|---|
| ID | 4013682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3852217 |
|---|
| End bp | 3852723 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637943311 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_550455 |
|---|
| Protein GI | 91789503 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCT TCGCCCACGA CGGTGTGACG CTTGTCGAAA CCACTTTGCT ACAAGAATTG
GAGCGGCTGG CCGAGGAAAC ACAGGAGCTG GGGCCTGATT CGGCTGTGAA GTGGCGGGCT
CGTGGGGAGT TGCGTCCCCG CGCCGGTGCC GACGACGAGG TCTGGCTGCA TTTGCAGGCG
GAGGCGGCTG TGCCGCTGAC CTGCCAGCGC TGCATGGGGG TGGTTGTCAC CCCTGTCCAG
GTGGATCAGT GGTACCGCTT TGTTGCCGAC GAAGACATTG CGATGGCCGA GGACGATCAG
TCCGAAGAAG ATCTGCTGGT CATGGAGCCA CAATTTGACC TGCTGGCCGT TCTGGAGGAC
GAGTTGTTGA TGGCCTTGCC GCTGGTGCCC ATGCATGACG AATGCCCGGT GGCGCCCAAG
CTGCAGGCGG GGGAGGTAGA GATCGGCGCC GAGGCCGGTC AGAAGCCCAA TCCTTTCGCG
GCGCTGGCGC AGCTCAAGAA AAAGTAA
|
|---|
| Protein sequence | MQAFAHDGVT LVETTLLQEL ERLAEETQEL GPDSAVKWRA RGELRPRAGA DDEVWLHLQA
EAAVPLTCQR CMGVVVTPVQ VDQWYRFVAD EDIAMAEDDQ SEEDLLVMEP QFDLLAVLED
ELLMALPLVP MHDECPVAPK LQAGEVEIGA EAGQKPNPFA ALAQLKKK
|
|---|
| |